RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MED22Q15528 200 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 ITPRIPL2Q3MIP1 535 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 TMEM52BQ4KMG9 183 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 TMEM201Q5SNT2 666 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 MEDAGQ5VYS4 303 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 FAM83HQ6ZRV2 1179 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 ATCAYQ86WG3 371 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 ADGRF3Q8IZF5 1079 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 POC5Q8NA72 575 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 GPR32P1Q8NGA4 272 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CHFRQ96EP1 664 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 TMEM19Q96HH6 336 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 OR5M11Q96RB7 305 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 TAPBPLQ9BX59 468 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PITHD1Q9GZP4 211 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PCBD2Q9H0N5 130 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PRDM8Q9NQV8 689 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 RHCGQ9UBD6 479 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 USP34Q70CQ2 3546 aa13.77□□□□□ -0.2
CDCA3-207ENST00000538862 WDR87Q6ZQQ6 2873 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 TRBV4-1A0A0J9YWV2 114 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 EDDM13A0A1B0GTR0 161 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 TLR4O00206 839 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 FAAHO00519 579 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 MAN2B1O00754 1011 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 KIAA0513O60268 411 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 ADH1CP00326 375 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 PCBP4P57723 403 aaKnown RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 SMIM11AP58511 58 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 NHLH1Q02575 133 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 SLC13A2Q13183 592 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 NCF4Q15080 339 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 TSTQ16762 297 aaKnown RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 HNRNPA1L2Q32P51 320 aaKnown RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 SOWAHCQ53LP3 525 aaPredicted RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 RPS26P11Q5JNZ5 115 aaPredicted RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 DCST1Q5T197 706 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 C9orf64Q5T6V5 341 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 SLX4IPQ5VYV7 408 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 TCTN3Q6NUS6 607 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 TNFAIP8L2Q6P589 184 aaPredicted RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 C6orf120Q7Z4R8 191 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 OR5AR1Q8NGP9 310 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 WDR36Q8NI36 951 aaKnown RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 TEFMQ96QE5 360 aaKnown RBP13.77□□□□□ -0.21
CDCA3-207ENST00000538862 RNF167Q9H6Y7 350 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 NT5DC2Q9H857 520 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 SLAMF7Q9NQ25 335 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 WASH6PQ9NQA3 447 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 PLXND1Q9Y4D7 1925 aa13.77□□□□□ -0.21
CDCA3-207ENST00000538862 A0A075B6Q4 140 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ARHGAP33O14559 1287 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 RPN2P04844 631 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ADRA2AP08913 450 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ELAVL4P26378 380 aaKnown RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 POU1F1P28069 291 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 CSTF2P33240 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 KCNJ5P48544 419 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ANGPT1Q15389 498 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 GDPGP1Q6ZNW5 385 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ERN2Q76MJ5 926 aaKnown RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 AMZ2Q86W34 360 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 C12orf40Q86WS4 652 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 NLGN4XQ8N0W4 816 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 CYP4Z2PQ8N1L4 340 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 IL17RCQ8NAC3 791 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 TFGQ92734 400 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ZNF354BQ96LW1 612 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ZNF607Q96SK3 696 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 TAS2R16Q9NYV7 291 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ACAD8Q9UKU7 415 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 PLAGL1Q9UM63 463 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 NINQ8N4C6 2090 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 LOC110117498-PIK3R3F6TDL0 507 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ENTPD6O75354 484 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 SCG5P05408 212 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 H1F0P07305 194 aaKnown RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 CCR8P51685 355 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ELAVL3Q14576 367 aaKnown RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 MLC1Q15049 377 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 FNDC3BQ53EP0 1204 aaKnown RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 SPANXN2Q5MJ10 180 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 RNLSQ5VYX0 342 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 CCDC190Q86UF4 302 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ANKRD53Q8N9V6 530 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 OR5K2Q8NHB8 316 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 KLHL6Q8WZ60 621 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 SMPDL3AQ92484 453 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 PIK3R3Q92569 461 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 FAM122AQ96E09 287 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ZBED6CLQ96FA7 236 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 COX14Q96I36 57 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 TXNDC15Q96J42 360 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 F2RL3Q96RI0 385 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 PRRX2Q99811 253 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ACAT2Q9BWD1 397 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 NUAK2Q9H093 628 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms