RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 FANCMQ8IYD8 2048 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 A0A1W2PS29 197 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 TMEM247A6NEH6 219 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 GUCY1B2O75343 617 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 SERPINB7O75635 380 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 F3P13726 295 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 KHKP50053 298 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 NUDT6P53370 316 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CEBPEQ15744 281 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 TMEM236Q5W0B7 351 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 VN1R4Q7Z5H5 301 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 SRFBP1Q8NEF9 429 aaKnown RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CCL4L1Q8NHW4 92 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 B4GALNT2Q8NHY0 566 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 TRUB1Q8WWH5 349 aaKnown RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 LCN9Q8WX39 176 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 TWSG1Q9GZX9 223 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 GPR83Q9NYM4 423 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 REV1Q9UBZ9 1251 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 FBXW2Q9UKT8 454 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CORINQ9Y5Q5 1042 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 LRP4O75096 1905 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CLDN24A6NM45 220 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 M0R082 166 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 PROM1O43490 865 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 OXSR1O95747 527 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 EPPINO95925 133 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 HMGN2P05204 90 aaKnown RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 H1F0P07305 194 aaKnown RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CHRM4P08173 479 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 NR2F1P10589 423 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 ALPPL2P10696 532 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 NDUFS1P28331 727 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CTSKP43235 329 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 C21orf59P57076 290 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CDC42P60953 191 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 RAB8AP61006 207 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 VBP1P61758 197 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 DEF8Q6ZN54 512 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 CCDC116Q8IYX3 515 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 VANGL1Q8TAA9 524 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 FLVCR1-AS1Q8TAF5 88 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 MIPOL1Q8TD10 442 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 WDR92Q96MX6 357 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 ITPAQ9BY32 194 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 KCNK12Q9HB15 430 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 SEMA3GQ9NS98 782 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 TBC1D23Q9NUY8 699 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 IMPAD1Q9NX62 359 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 TRPC4Q9UBN4 977 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 A4GNTQ9UNA3 340 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 DUSP12Q9UNI6 340 aa13.22□□□□□ -0.29
LIMK1-208ENST00000538333 ARHGEF17Q96PE2 2063 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-208ENST00000538333 A6NCN8 305 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 BTN3A3O00478 584 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 FAAHO00519 579 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 ASGR2P07307 311 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 CD36P16671 472 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 ALDH4A1P30038 563 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 PPP2R1BP30154 601 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 ACSL1P33121 698 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 LIPAP38571 399 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 CRISP3P54108 245 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 STXBP1P61764 594 aaKnown RBP13.21□□□□□ -0.29
LIMK1-208ENST00000538333 NCS1P62166 190 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 LSM3P62310 102 aaKnown RBP13.21□□□□□ -0.29
LIMK1-208ENST00000538333 LASP1Q14847 261 aaKnown RBP13.21□□□□□ -0.29
LIMK1-208ENST00000538333 TCEA2Q15560 299 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 LEXMQ3ZCV2 418 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 DCST1Q5T197 706 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 BBS10Q8TAM1 723 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 SLC7A13Q8TCU3 470 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 OTUB1Q96FW1 271 aaPredicted RBP13.21□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF681Q96N22 645 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 PALMDQ9NP74 551 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 NDOR1Q9UHB4 597 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 TMCC3Q9ULS5 477 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 MGAT4BQ9UQ53 548 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 NCKAP1Q9Y2A7 1128 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 DNAH14Q0VDD8 3507 aa13.21□□□□□ -0.29
LIMK1-208ENST00000538333 NARSO43776 548 aaKnown RBP13.21□□□□□ -0.3
LIMK1-208ENST00000538333 FHP07954 510 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 STSP08842 583 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 C8orf89P0DMQ9 161 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 OSMP13725 252 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 CNR2P34972 360 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 FEN1P39748 380 aaKnown RBP13.21□□□□□ -0.3
LIMK1-208ENST00000538333 OPRL1P41146 370 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 PRKAG1P54619 331 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 SNRPNP63162 240 aaKnown RBP13.21□□□□□ -0.3
LIMK1-208ENST00000538333 ILKQ13418 452 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 IRF3Q14653 427 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms