RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 JRKO75564 520 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 C1RP00736 705 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 RPIAP49247 311 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PCBP2Q15366 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PRAMEF18Q5VWM3 479 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 BLOC1S3Q6QNY0 202 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 GPR149Q86SP6 731 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 METTL3Q86U44 580 aaKnown RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF546Q86UE3 836 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 KDM8Q8N371 416 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 LINC01599Q8WXQ3 324 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF597Q96LX8 424 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 FCRL3Q96P31 734 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SLC19A3Q9BZV2 496 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 TCEAL2Q9H3H9 227 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 MINDY3Q9H8M7 445 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PLEKHM1Q9Y4G2 1056 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 TTC24A2A3L6 582 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 FADS1O60427 444 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 RAF1P04049 648 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 RAB3AP20336 220 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 GMPRP36959 345 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PPIGQ13427 754 aaKnown RBP eCLIP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 TMEM41BQ5BJD5 291 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ANGPTL6Q8NI99 470 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 LRR1Q96L50 414 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 THAP7Q9BT49 309 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 LUZP4Q9P127 313 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PRELID3BQ9Y3B1 194 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 C2CD4BA6NLJ0 364 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 NME4O00746 187 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ACPPP15309 386 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 HTR1EP28566 365 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 DPY19L2P1Q6NXN4 242 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 FAM122BQ7Z309 247 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SMARCD2Q92925 531 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 GPR22Q99680 433 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 DTLQ9NZJ0 730 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ACTL7AQ9Y615 435 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PSMD10O75832 226 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 FOXB2Q5VYV0 432 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 OR4F3Q6IEY1 312 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF783Q6ZMS7 281 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ZSWIM9Q86XI8 627 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 KIAA0319LQ8IZA0 1049 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 CNN2Q99439 309 aaKnown RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 MICU1Q9BPX6 476 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 MAGIXQ9H6Y5 334 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 ENY2Q9NPA8 101 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 KCNS2Q9ULS6 477 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 NOX1Q9Y5S8 564 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 NR2E3Q9Y5X4 410 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PTCH2Q9Y6C5 1203 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 LRRC72A6NJI9 287 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 RFXAPO00287 272 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 CRTAPO75718 401 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 RRAS2P62070 204 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SCGB2A2Q13296 93 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SLBPQ14493 270 aaKnown RBP eCLIP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SOHLH1Q5JUK2 328 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 OR52E4Q8NGH9 312 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 OR10R2Q8NGX6 335 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SORCS1Q8WY21 1168 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 KCNJ9Q92806 393 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 FCRL1Q96LA6 429 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SMIM3Q9BZL3 60 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 FBRSL1Q9HCM7 1045 aaKnown RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 NEUROD4Q9HD90 331 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PLCXD1Q9NUJ7 323 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 CNTNAP4Q9C0A0 1308 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 A0A096LPI6 279 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 MDFIC2A0A1B0GVS7 189 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 C6orf47O95873 294 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 C8GP07360 202 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 POLR2CP19387 275 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 BAK1Q16611 211 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PDZD11Q5EBL8 140 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 LINGO4Q6UY18 593 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 TTLL10Q6ZVT0 673 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SAMD14Q8IZD0 417 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 REPS2Q8NFH8 660 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 OR4E2Q8NGC2 313 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 COPS5Q92905 334 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 HIST1H2AAQ96QV6 131 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SLC25A18Q9H1K4 315 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 FZD3Q9NPG1 666 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 TAS2R8Q9NYW2 309 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 INTS6Q9UL03 887 aaKnown RBP5.43□□□□□ -1.54
CSMD1-215ENST00000537824 TMEM235A6NFC5 223 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 GABRDO14764 452 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 GPR182O15218 404 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 DFFBO76075 338 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PDYNP01213 254 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PPP3CBP16298 524 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 GRPRP30550 384 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 CD47Q08722 323 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 OR2AJ1Q8NGZ0 328 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 SMPDL3AQ92484 453 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 PKMYT1Q99640 499 aa5.43□□□□□ -1.54
CSMD1-215ENST00000537824 MKS1Q9NXB0 559 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms