RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 DDA1Q9BW61 102 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CUEDC2Q9H467 287 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 GPN2Q9H9Y4 310 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 RAB20Q9NX57 234 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 COX16Q9P0S2 106 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 SMC3Q9UQE7 1217 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 OR1A2Q9Y585 309 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 SNX10Q9Y5X0 201 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 ACANP16112 2415 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 PVALEFA0A1B0GWK0 134 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 OR5K3A6NET4 321 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 C5orf60A6NFR6 353 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 LIPT2A6NK58 231 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 MKRN2OSH3BPM6 223 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 TMEM178BH3BS89 294 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 PDXKO00764 312 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 MAPK13O15264 365 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 POLR2DO15514 142 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ZMPSTE24O75844 475 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 CCNDBP1O95273 360 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 CPNE6O95741 557 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 RHOCP08134 193 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 THRAP10827 490 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 VDRP11473 427 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 FGF5P12034 268 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ANOS1P23352 680 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 NR2F2P24468 414 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 NFKBIAP25963 317 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 CD1CP29017 333 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 PRCPP42785 496 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 RPL34P49207 117 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 SERPINH1P50454 418 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 SRP54P61011 504 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 KRT83P78385 493 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 MRPS34P82930 218 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ARF5P84085 180 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ZBED6P86452 979 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ADIPOQQ15848 244 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 KLHL40Q2TBA0 621 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 WSCD2Q2TBF2 565 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 NKAIN2Q5VXU1 208 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 SPECC1LQ69YQ0 1117 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 KRT39Q6A163 491 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ZNF704Q6ZNC4 412 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 Q75L30 129 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 INTS8Q75QN2 995 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 GKN2Q86XP6 184 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 EPHX4Q8IUS5 362 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 KLHDC8BQ8IXV7 354 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ZNF683Q8IZ20 524 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 RASGEF1CQ8N431 466 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 TTC39CQ8N584 583 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 BMPERQ8N8U9 685 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ATP6V0D2Q8N8Y2 350 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 IQUBQ8NA54 791 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 DCAF4L2Q8NA75 395 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ZBTB8BQ8NAP8 495 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 RBM15BQ8NDT2 890 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 FBXL13Q8NEE6 735 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 UTP15Q8TED0 518 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 TMEM255BQ8WV15 326 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 OR1E3Q8WZA6 343 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ARHGEF2Q92974 986 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 HSFY1Q96LI6 401 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 C1orf74Q96LT6 269 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 NAP1L5Q96NT1 182 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 CTRCQ99895 268 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 WRAP53Q9BUR4 548 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 TM6SF2Q9BZW4 377 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 DNAI2Q9GZS0 605 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 LRMDAQ9H2I8 198 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 ZDHHC6Q9H6R6 413 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 MAGIXQ9H6Y5 334 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 FKRPQ9H9S5 495 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 FGF22Q9HCT0 170 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 APMAPQ9HDC9 416 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 MRPL40Q9NQ50 206 aaKnown RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 SLC39A1Q9NY26 324 aa4.94□□□□□ -1.62
CLIP1-207ENST00000536634 AKAP7Q9P0M2 348 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 MARCH4Q9P2E8 410 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-207ENST00000536634 PLPP2O43688 288 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 NUDT21O43809 227 aaKnown RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 NDUFS3O75489 264 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 CLDN11O75508 207 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 WISP2O76076 250 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 ADCY5O95622 1261 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 CD160O95971 181 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 IGHV4-39P01824 125 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 PCCBP05166 539 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 UGT2B4P06133 528 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 TCN2P20062 427 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 PSMA4P25789 261 aaKnown RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 ALDH4A1P30038 563 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 GTF2H1P32780 548 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 ARCN1P48444 511 aaKnown RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 DNA2P51530 1060 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 LIMK2P53671 638 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 CDH4P55283 916 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 LRMPQ12912 555 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 NR1D2Q14995 579 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms