RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SNNO75324 88 aaPredicted RBP21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 ATP6AP2O75787 350 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 PTGER1P34995 402 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 SOX18P35713 384 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 RPL14P50914 215 aaKnown RBP21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 HK2P52789 917 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 SLC37A1P57057 533 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 MGAT2Q10469 447 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 FUT7Q11130 342 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 INPP5JQ15735 1006 aaPredicted RBP21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 TICAM1Q8IUC6 712 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 C9orf40Q8IXQ3 194 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 RAB3IL1Q8TBN0 382 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 PNPOQ9NVS9 261 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 THAP1Q9NVV9 213 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 HMGB1P1B2RPK0 211 aaPredicted RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 ITGA10O75578 1167 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 NEURL1O76050 574 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 BCKDHAP12694 445 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 S1PR1P21453 382 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 SSTR4P31391 388 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 OC90Q02509 493 aaPredicted RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 MAP4K2Q12851 820 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 OR1C1Q15619 314 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 LTB4RQ15722 352 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 CEBPEQ15744 281 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 PDCD2Q16342 344 aaPredicted RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 PRICKLE4Q2TBC4 344 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 ATP6AP1LQ52LC2 224 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 C6orf136Q5SQH8 315 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 RPUSD3Q6P087 351 aaKnown RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 ZNF227Q86WZ6 799 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 TRIM42Q8IWZ5 723 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 SAMD14Q8IZD0 417 aaPredicted RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 KIRREL3Q8IZU9 778 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 LRRC25Q8N386 305 aaPredicted RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 CISD2Q8N5K1 135 aaKnown RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 GOLGA6L1Q8N7Z2 621 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 OR5L2Q8NGL0 311 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 NUBPLQ8TB37 319 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 CPT1CQ8TCG5 803 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 SNRNP40Q96DI7 357 aaKnown RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.08■□□□□ 0.974e-7■■■□□ 17.6
SFSWAP-204ENST00000535399 ZNF446Q9NWS9 450 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 TAS2R7Q9NYW3 318 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 MAT2BQ9NZL9 334 aa21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 YARS2Q9Y2Z4 477 aaKnown RBP21.08■□□□□ 0.97
SFSWAP-204ENST00000535399 NBASA2RRP1 2371 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 WWP2O00308 870 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 OR2J2O76002 312 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 HLCSP50747 726 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 SPINK14Q6IE38 97 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 FAM111BQ6SJ93 734 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 RNF111Q6ZNA4 994 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 CCDC116Q8IYX3 515 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF615Q8N8J6 731 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 ADCY4Q8NFM4 1077 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 SUN3Q8TAQ9 357 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 MIB2Q96AX9 1013 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 CTHRC1Q96CG8 243 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 TUBGCP3Q96CW5 907 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 TSSK3Q96PN8 268 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 MANSC1Q9H8J5 431 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 MIEF1Q9NQG6 463 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 PFDN4Q9NQP4 134 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 LRFN1Q9P244 771 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 BAIAP2L1Q9UHR4 511 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF639Q9UID6 485 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 ENTPD4Q9Y227 616 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 NTNG1Q9Y2I2 539 aa21.07■□□□□ 0.96
SFSWAP-204ENST00000535399 OR6C76A6NM76 312 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 CYB561P49447 251 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 SSR4P51571 173 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 OCRLQ01968 901 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 EBPQ15125 230 aaKnown RBP21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 MPEG1Q2M385 716 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF766Q5HY98 468 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 C6orf163Q5TEZ5 329 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 ATG16L1Q676U5 607 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 VWA5B2Q8N398 1253 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 OR7G1Q8NGA0 311 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 GFM2Q969S9 779 aaKnown RBP21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 RASL10BQ96S79 203 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 HES7Q9BYE0 225 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 BRINP2Q9C0B6 783 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 GIMAP4Q9NUV9 329 aa21.06■□□□□ 0.96
SFSWAP-204ENST00000535399 PYCARD-AS1I3L0S3 204 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 J3QKU1 62 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 KLF11O14901 512 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF354AO60765 605 aaPredicted RBP21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 FOXK1P85037 733 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 DUSP8Q13202 625 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 IGFBP7Q16270 282 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF628Q5EBL2 1059 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 PIGGQ5H8A4 983 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 TMEM156Q8N614 296 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 OR9A2Q8NGT5 310 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 CLHC1Q8NHS4 586 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF675Q8TD23 568 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF75CPQ92670 426 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms