RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CBX7O95931 251 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 IMPDH1P20839 514 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 SNTB1Q13884 538 aaKnown RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 SERTAD2Q14140 314 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 GGTA1PQ4G0N0 100 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 FNDC7Q5VTL7 733 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 WDR53Q7Z5U6 358 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 CCDC91Q7Z6B0 441 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 NUDT13Q86X67 352 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 LURAP1LQ8IV03 231 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 ST13P4Q8IZP2 240 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 ZNF295-AS1Q8N0V1 137 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 CCNYL1Q8N7R7 359 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 UBLCP1Q8WVY7 318 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 KAT2AQ92830 837 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 ADIPOR1Q96A54 375 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 RBM18Q96H35 190 aaKnown RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 SERPINI1Q99574 410 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 CCDC77Q9BR77 488 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 ROGDIQ9GZN7 287 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 NXF5Q9H1B4 397 aaKnown RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 ELOVL6Q9H5J4 265 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 PLSCR2Q9NRY7 297 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 LYARQ9NX58 379 aaKnown RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 PSMC3IPQ9P2W1 217 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 GIMAP2Q9UG22 337 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 PHF11Q9UIL8 331 aa8.87□□□□□ -0.99
SSBP3-215ENST00000533946 CNOT11Q9UKZ1 510 aaKnown RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 KLF13Q9Y2Y9 288 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 CHCHD2Q9Y6H1 151 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 PHF3Q92576 2039 aaKnown RBP8.87□□□□□ -0.99
SSBP3-215ENST00000533946 NKX2-6A6NCS4 301 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TMEM233B4DJY2 109 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 PLIN3O60664 434 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 ERAL1O75616 437 aaKnown RBP8.86□□□□□ -0.99
SSBP3-215ENST00000533946 SEMA3DO95025 777 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TUBB4AP04350 444 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TPOP07202 933 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 IL3P08700 152 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 SLC35E2P0CK97 266 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 CPMP14384 443 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 ABOP16442 354 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 PCSK2P16519 638 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 CNR1P21554 472 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 NT5EP21589 574 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 ATP5F1P24539 256 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TACR1P25103 407 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 CNTFP26441 200 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 HTR1EP28566 365 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 SERPINB1P30740 379 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TRPC1P48995 793 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 ALDH9A1P49189 494 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 MAPK12P53778 367 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 NAGLUP54802 743 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 FUT7Q11130 342 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 IFT88Q13099 833 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 SPRED3Q2MJR0 410 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 PRICKLE4Q2TBC4 344 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 CLEC6AQ6EIG7 209 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 SLC48A1Q6P1K1 146 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 RNF111Q6ZNA4 994 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 CEP128Q6ZU80 1094 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 GPRIN3Q6ZVF9 776 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 LIX1LQ8IVB5 337 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 FAM13CQ8NE31 585 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 OR2T11Q8NH01 316 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 METTL6Q8TCB7 284 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 MARVELD3Q96A59 401 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TMEM125Q96AQ2 219 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 L3HYPDHQ96EM0 354 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 C11orf24Q96F05 449 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-215ENST00000533946 MAGED4Q96JG8 741 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 EGLN2Q96KS0 407 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 ZNF382Q96SR6 550 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 MECRQ9BV79 373 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 SLC6A15Q9H2J7 730 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 ZDHHC11Q9H8X9 412 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 PSD3Q9NYI0 1048 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 MAT2BQ9NZL9 334 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 SLC17A7Q9P2U7 560 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TRPS1Q9UHF7 1281 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 ADGRE2Q9UHX3 823 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 PPT2Q9UMR5 302 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 DLGAP4Q9Y2H0 992 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 CCL27Q9Y4X3 112 aa8.86□□□□□ -0.99
SSBP3-215ENST00000533946 INTS1Q8N201 2190 aaKnown RBP8.86□□□□□ -0.99
SSBP3-215ENST00000533946 TLDC2A0PJX2 215 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 KLRC4-KLRK1H3BQV0 150 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 KIF2AO00139 706 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-215ENST00000533946 SPAG7O75391 227 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 OTCP00480 354 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 FBXO45P0C2W1 286 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 EFNA1P20827 205 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-215ENST00000533946 GPX3P22352 226 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 PIK3R1P27986 724 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 PTGS2P35354 604 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 ADH7P40394 386 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 PTGDSP41222 190 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms