RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PHGDHO43175 533 aaKnown RBP11.9□□□□□ -0.5
COPB1-209ENST00000533096 GPR75O95800 540 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 S100BP04271 92 aaPredicted RBP11.9□□□□□ -0.5
COPB1-209ENST00000533096 SSTR4P31391 388 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 SOX18P35713 384 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 GGT5P36269 586 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 CASP3P42574 277 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 SLC37A1P57057 533 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 IGLV3-21P80748 117 aaPredicted RBP11.9□□□□□ -0.5
COPB1-209ENST00000533096 SORDQ00796 357 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 BIKQ13323 160 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 OR4D1Q15615 310 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 TBCELQ5QJ74 424 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 DEPDC1Q5TB30 811 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 KHDRBS2Q5VWX1 349 aaKnown RBP11.9□□□□□ -0.5
COPB1-209ENST00000533096 MED27Q6P2C8 311 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 ANGPTL8Q6UXH0 198 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 CAPN12Q6ZSI9 719 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 YTHDF3Q7Z739 585 aaKnown RBP11.9□□□□□ -0.5
COPB1-209ENST00000533096 ST13P4Q8IZP2 240 aaPredicted RBP11.9□□□□□ -0.5
COPB1-209ENST00000533096 GCNT2Q8N0V5 402 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 C7orf57Q8NEG2 295 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 SPPL2AQ8TCT8 520 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 ISL2Q96A47 359 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 RGMAQ96B86 450 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 CMTM7Q96FZ5 175 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 TUBA1CQ9BQE3 449 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 ANGPTL4Q9BY76 406 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 DDX47Q9H0S4 455 aaKnown RBP11.9□□□□□ -0.5
COPB1-209ENST00000533096 JKAMPQ9P055 326 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 C15orf41Q9Y2V0 281 aa11.9□□□□□ -0.5
COPB1-209ENST00000533096 ZNF407Q9C0G0 2248 aa11.9□□□□□ -0.51
COPB1-209ENST00000533096 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 MBD3L4A6NDZ8 208 aaPredicted RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 MBD3L3A6NE82 208 aaPredicted RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 MBD3L5A6NJ08 208 aaPredicted RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 H0Y3Z8 333 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 SMNDC1O75940 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
COPB1-209ENST00000533096 IL18BPO95998 194 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 KRT15P19012 456 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 EPORP19235 508 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 CDC25BP30305 580 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 GCKP35557 465 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 CPOXP36551 454 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 GMPRP36959 345 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 STARP49675 285 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 HNRNPH2P55795 449 aaKnown RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 FAM27E3Q08E93 113 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 EBPQ15125 230 aaKnown RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 RPS6KA2Q15349 733 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 FNDC7Q5VTL7 733 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 DESI1Q6ICB0 168 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 OR7G3Q8NG95 312 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 OR1J4Q8NGS1 313 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 MBD3L2Q8NHZ7 208 aaPredicted RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 PIGTQ969N2 578 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 UBE2E3Q969T4 207 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 WDR34Q96EX3 536 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 PIK3IP1Q96FE7 263 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 COX4I2Q96KJ9 171 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 WFIKKN1Q96NZ8 548 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 MTERF1Q99551 399 aaKnown RBP11.89□□□□□ -0.51
COPB1-209ENST00000533096 CD244Q9BZW8 370 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 DERL2Q9GZP9 239 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 METTL7AQ9H8H3 244 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 MS4A12Q9NXJ0 267 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 KLHL28Q9NXS3 571 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 PHF11Q9UIL8 331 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 RNF112Q9ULX5 631 aa11.89□□□□□ -0.51
COPB1-209ENST00000533096 A0A1W2PR48 441 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 GBAP04062 536 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 TCEA1P23193 301 aaKnown RBP11.88□□□□□ -0.51
COPB1-209ENST00000533096 BUD31P41223 144 aaPredicted RBP11.88□□□□□ -0.51
COPB1-209ENST00000533096 CASP2P42575 452 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 FNTAP49354 379 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 NRG3P56975 720 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 RPP38P78345 283 aaKnown RBP11.88□□□□□ -0.51
COPB1-209ENST00000533096 TNFRSF17Q02223 184 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 PDIA2Q13087 525 aaKnown RBP11.88□□□□□ -0.51
COPB1-209ENST00000533096 CBLBQ13191 982 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 KBTBD12Q3ZCT8 623 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 TIGD3Q6B0B8 471 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 CYP20A1Q6UW02 462 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 ZNF662Q6ZS27 426 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 FBXO36Q8NEA4 188 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 OR14L1PQ8NHC6 308 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 HUS1BQ8NHY5 278 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 ZPLD1Q8TCW7 415 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 FAM111AQ96PZ2 611 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 TM9SF2Q99805 663 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 CENPKQ9BS16 269 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 UBQLN3Q9H347 655 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 SERHLQ9NQF3 203 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 PTBP2Q9UKA9 531 aaKnown RBP11.88□□□□□ -0.51
COPB1-209ENST00000533096 JRKLQ9Y4A0 524 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 ANGPTL3Q9Y5C1 460 aa11.88□□□□□ -0.51
COPB1-209ENST00000533096 TEX264Q9Y6I9 313 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms