RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 KLHL29Q96CT2 875 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 C11orf24Q96F05 449 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-210ENST00000532935 EBPLQ9BY08 206 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 WWTR1Q9GZV5 400 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 TIMMDC1Q9NPL8 285 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 SIRT5Q9NXA8 310 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 FAM53CQ9NYF3 392 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 SENP1Q9P0U3 644 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 HEY2Q9UBP5 337 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 SEC14L3Q9UDX4 400 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 PSME2Q9UL46 239 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 OSGIN2Q9Y236 505 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 DLGAP4Q9Y2H0 992 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 ICE1Q9Y2F5 2266 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 OR6C76A6NM76 312 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 KLRC4-KLRK1H3BQV0 150 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 AZIN1O14977 448 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 TYROBPO43914 113 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 PEX1O43933 1283 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 NPHS1O60500 1241 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 WISP2O76076 250 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 UNC5CO95185 931 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 IL3P08700 152 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 ANXA4P09525 319 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-210ENST00000532935 CT62P0C5K7 136 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 DRD2P14416 443 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 CSNK2A2P19784 350 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-210ENST00000532935 SSTR4P31391 388 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 FEN1P39748 380 aaKnown RBP14.22□□□□□ -0.13
CPSF1-210ENST00000532935 MEOX1P50221 254 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 FUT7Q11130 342 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 EBPQ15125 230 aaKnown RBP14.22□□□□□ -0.13
CPSF1-210ENST00000532935 C6orf163Q5TEZ5 329 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 MYO7BQ6PIF6 2116 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 OPN5Q6U736 354 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 POGLUT1Q8NBL1 392 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 PSD4Q8NDX1 1056 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 SLC22A8Q8TCC7 542 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 C16orf78Q8WTQ4 265 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 SSC4DQ8WTU2 575 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 GAL3ST4Q96RP7 486 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 TSPAN10Q9H1Z9 355 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-210ENST00000532935 ERRFI1Q9UJM3 462 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-210ENST00000532935 UTS2RQ9UKP6 389 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 SLC5A6Q9Y289 635 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF780BQ9Y6R6 833 aa14.22□□□□□ -0.13
CPSF1-210ENST00000532935 DOPEY1Q5JWR5 2465 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 NINQ8N4C6 2090 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 NPIPA5E9PKD4 350 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 RSL1D1O76021 490 aaKnown RBP14.21□□□□□ -0.13
CPSF1-210ENST00000532935 NADKO95544 446 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-210ENST00000532935 ATP1B1P05026 303 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF24P17028 368 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 GSTM5P46439 218 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 GPR85P60893 370 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 DUSP2Q05923 314 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 HEPACAMQ14CZ8 416 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 RNFT1Q5M7Z0 435 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 FAM180BQ6P0A1 224 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 RTL4Q6ZR62 310 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 SIAH3Q8IW03 269 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 SLC15A4Q8N697 577 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF615Q8N8J6 731 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 CNRIP1Q96F85 164 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-210ENST00000532935 SGCZQ96LD1 299 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 GPR137Q96N19 417 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF681Q96N22 645 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 ZIM3Q96PE6 472 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 NPIPA1Q9UND3 350 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 FIS1Q9Y3D6 152 aa14.21□□□□□ -0.13
CPSF1-210ENST00000532935 SLC28A1O00337 649 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 CHRNGP07510 517 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 STSP08842 583 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 RNF224P0DH78 156 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 S1PR1P21453 382 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 PTGER1P34995 402 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 RFC3P40938 356 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 ETV4P43268 484 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF763Q0D2J5 394 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 MGAT2Q10469 447 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 MAP4K2Q12851 820 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 PRICKLE4Q2TBC4 344 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 C4orf17Q53FE4 359 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 KRTCAP3Q53RY4 240 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 ARL13AQ5H913 290 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-210ENST00000532935 CEP85LQ5SZL2 805 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 KANK2Q63ZY3 851 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 FAM111BQ6SJ93 734 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 RNF165Q6ZSG1 346 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 ZCCHC23Q6ZST2 131 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 LRRC25Q8N386 305 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-210ENST00000532935 VWA5B2Q8N398 1253 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF441Q8N8Z8 693 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 ZFP62Q8NB50 900 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-210ENST00000532935 GOLM1Q8NBJ4 401 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 OR7G1Q8NGA0 311 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 FAM76AQ8TAV0 307 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 EXOSC8Q96B26 276 aaKnown RBP14.2□□□□□ -0.14
CPSF1-210ENST00000532935 PSMG3-AS1Q96PY0 264 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 BRINP2Q9C0B6 783 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms