RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TM7SF2O76062 418 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 LGI1O95970 557 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 HPRP00739 348 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 NPPAP01160 153 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TRBC1P01850 177 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 MT-ND2P03891 347 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 OPN1LWP04000 364 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 GSTA1P08263 222 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PLEKP08567 350 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PRR23D2P0DMB1 279 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 OR8G3PP0DMU2 310 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 IGHV4-31P0DP07 118 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 MYOD1P15172 320 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 EFNA1P20827 205 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 MSR1P21757 451 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 UQCRC2P22695 453 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 GLRA1P23415 457 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 LMO1P25800 156 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 GJB2P29033 226 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 CDC25AP30304 524 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 CYLC1P35663 651 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 SLC11A1P49279 550 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 NDST1P52848 882 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 CLDN8P56748 225 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 YWHAGP61981 247 aaKnown RBP eCLIP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF91Q05481 1191 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF155Q12901 538 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 GAGE5Q13069 117 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 GAGE6Q13070 117 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 MTX1Q13505 466 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 CDSNQ15517 529 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 HAGHQ16775 308 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 MTHFSDQ2M296 383 aaKnown RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM44Q2T9K0 475 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 GPR33Q49SQ1 333 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 XKR7Q5GH72 579 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 XKR3Q5GH77 459 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TTC19Q6DKK2 380 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 OR7E24Q6IFN5 339 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TRIM65Q6PJ69 517 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM64Q6YI46 380 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 KDM7AQ6ZMT4 941 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 P4HA3Q7Z4N8 544 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 LUZP2Q86TE4 346 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PARGQ86W56 976 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 GPC2Q8N158 579 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 LRTM2Q8N967 370 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 OR1J1Q8NGS3 322 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 KCNG3Q8TAE7 436 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 C8orf46Q8TAG6 207 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 FAM81AQ8TBF8 368 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ASB5Q8WWX0 329 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TANKQ92844 425 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 SLC35C1Q96A29 364 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PNPLA2Q96AD5 504 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 CIDECQ96AQ7 238 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 COQ8BQ96D53 544 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ZG16BQ96DA0 208 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ZBED3Q96IU2 234 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 IFT74Q96LB3 600 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 C4orf45Q96LM5 186 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TGS1Q96RS0 853 aaKnown RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TUBGCP2Q9BSJ2 902 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 TRAF4Q9BUZ4 470 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PARD6BQ9BYG5 372 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ROPN1BQ9BZX4 212 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 FAM49AQ9H0Q0 323 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 KLK15Q9H2R5 256 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 DHX33Q9H6R0 707 aaKnown RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 APOBEC3GQ9HC16 384 aaKnown RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 MCCC2Q9HCC0 563 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 S100A14Q9HCY8 104 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 SDR39U1Q9NRG7 319 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 STARD5Q9NSY2 213 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 SEMA4GQ9NTN9 838 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ASB6Q9NWX5 421 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 SMARCAL1Q9NZC9 954 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF224Q9NZL3 707 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 C19orf25Q9UFG5 118 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 SIX4Q9UIU6 781 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PRDM4Q9UKN5 801 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PACSIN3Q9UKS6 424 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 ELF5Q9UKW6 265 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 RNF115Q9Y4L5 304 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 OR1A2Q9Y585 309 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PPIAL4EA0A075B759 164 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 FBLL1A6NHQ2 334 aaKnown RBP3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 MANSC4A6NHS7 340 aaPredicted RBP3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 LRRC30A6NM36 301 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 A8MVM7 634 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 C9JVG2 144 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 NPIPA7E9PJI5 369 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 CFLARO15519 480 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 P2RX6O15547 441 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 RNF13O43567 381 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 KRT86O43790 486 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 XPNPEP2O43895 674 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 SAP30O75446 220 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 NEBLO76041 1014 aa3.88□□□□□ -1.79
AC055878.1-201ENST00000531858 FGF19O95750 216 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms