RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 PPP1R36Q96LQ0 422 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 PPP3R2Q96LZ3 170 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ZNF681Q96N22 645 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 TSSK3Q96PN8 268 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 SIGLEC12Q96PQ1 595 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 UTP23Q9BRU9 249 aaKnown RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 MIEF1Q9NQG6 463 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 PFDN4Q9NQP4 134 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ZNF446Q9NWS9 450 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 PSME2Q9UL46 239 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 EXO1Q9UQ84 846 aaKnown RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 TMED5Q9Y3A6 229 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ZNF780BQ9Y6R6 833 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ZNF462Q96JM2 2506 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 TRAV17A0A0B4J275 112 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 HMGB1P1B2RPK0 211 aaPredicted RBP11.02□□□□□ -0.65
LTBP3-219ENST00000530990 WWP2O00308 870 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 SNNO75324 88 aaPredicted RBP11.02□□□□□ -0.65
LTBP3-219ENST00000530990 OR2J2O76002 312 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 SOX18P35713 384 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 RPL14P50914 215 aaKnown RBP11.02□□□□□ -0.65
LTBP3-219ENST00000530990 SLC37A1P57057 533 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 OC90Q02509 493 aaPredicted RBP11.02□□□□□ -0.65
LTBP3-219ENST00000530990 EBPQ15125 230 aaKnown RBP11.02□□□□□ -0.65
LTBP3-219ENST00000530990 OR1C1Q15619 314 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 INPP5JQ15735 1006 aaPredicted RBP11.02□□□□□ -0.65
LTBP3-219ENST00000530990 PRICKLE4Q2TBC4 344 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 ATP6AP1LQ52LC2 224 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 C6orf163Q5TEZ5 329 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 FAM111BQ6SJ93 734 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 TICAM1Q8IUC6 712 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 VWA5B2Q8N398 1253 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 ADCY4Q8NFM4 1077 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 SUN3Q8TAQ9 357 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 RAB3IL1Q8TBN0 382 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 CPT1CQ8TCG5 803 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 GFM2Q969S9 779 aaKnown RBP11.02□□□□□ -0.65
LTBP3-219ENST00000530990 TUBGCP3Q96CW5 907 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 GAL3ST4Q96RP7 486 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 C1orf50Q9BV19 199 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 HES7Q9BYE0 225 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 BRINP2Q9C0B6 783 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 PNPOQ9NVS9 261 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 MAT2BQ9NZL9 334 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 MYOTQ9UBF9 498 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 BAIAP2L1Q9UHR4 511 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 ENTPD4Q9Y227 616 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 NTNG1Q9Y2I2 539 aa11.02□□□□□ -0.65
LTBP3-219ENST00000530990 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 ZNF354AO60765 605 aaPredicted RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 PRAMEF2O60811 474 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 NEURL1O76050 574 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 LRATO95237 230 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 BCKDHAP12694 445 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 TRHRP34981 398 aaPredicted RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 SSR4P51571 173 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 MRPS35P82673 323 aaKnown RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 OCRLQ01968 901 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 MGAT2Q10469 447 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 FUT7Q11130 342 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 EXOSC7Q15024 291 aaKnown RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 CEBPEQ15744 281 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 C6orf136Q5SQH8 315 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 ATG16L1Q676U5 607 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 SPINK14Q6IE38 97 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 ANKRD26P1Q6NSI1 321 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 ZNF227Q86WZ6 799 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 TRIM42Q8IWZ5 723 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 CCDC116Q8IYX3 515 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 LIX1Q8N485 282 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 CISD2Q8N5K1 135 aaKnown RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 FNDC5Q8NAU1 212 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 SIMC1Q8NDZ2 872 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 OR9A2Q8NGT5 310 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 NUBPLQ8TB37 319 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 SNRNP40Q96DI7 357 aaKnown RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 RASL10BQ96S79 203 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 NUF2Q9BZD4 464 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 MANSC1Q9H8J5 431 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 SLC35C2Q9NQQ7 365 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 GIMAP4Q9NUV9 329 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 THAP1Q9NVV9 213 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 LRFN1Q9P244 771 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 MAP10Q9P2G4 905 aa11.01□□□□□ -0.65
LTBP3-219ENST00000530990 MARCOQ9UEW3 520 aaPredicted RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 YARS2Q9Y2Z4 477 aaKnown RBP11.01□□□□□ -0.65
LTBP3-219ENST00000530990 OR6C76A6NM76 312 aa11□□□□□ -0.65
LTBP3-219ENST00000530990 AKAP10O43572 662 aa11□□□□□ -0.65
LTBP3-219ENST00000530990 SLC25A12O75746 678 aa11□□□□□ -0.65
LTBP3-219ENST00000530990 OR6B1O95007 311 aa11□□□□□ -0.65
LTBP3-219ENST00000530990 NADKO95544 446 aaPredicted RBP11□□□□□ -0.65
LTBP3-219ENST00000530990 CBX7O95931 251 aa11□□□□□ -0.65
LTBP3-219ENST00000530990 PCSK2P16519 638 aa11□□□□□ -0.65
LTBP3-219ENST00000530990 S1PR1P21453 382 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms