RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 AHSPQ9NZD4 102 aa19.25■□□□□ 0.67
SMPD1-204ENST00000530395 ITGB1BP2Q9UKP3 347 aa19.25■□□□□ 0.67
SMPD1-204ENST00000530395 NCKAP5O14513 1909 aa19.25■□□□□ 0.67
SMPD1-204ENST00000530395 ARHGAP21Q5T5U3 1957 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 C2orf92A0A1B0GVN3 265 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 FAM47E-STBD1D6RA91 191 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 KRT38O76015 456 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 TOXO94900 526 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 ACSL3O95573 720 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 GBAP04062 536 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 KRTAP10-9P60411 292 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 TFF3Q07654 80 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 IFT88Q13099 833 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 WHAMMP3Q1A5X7 153 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 TBCELQ5QJ74 424 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 HLA-DQA1Q5Y7H0 255 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 PAGE2Q7Z2X7 111 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 CDH24Q86UP0 819 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 GALNT12Q8IXK2 581 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 LIX1Q8N485 282 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 ISL2Q96A47 359 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 DOHHQ9BU89 302 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 NTMT1Q9BV86 223 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 CDC42EP4Q9H3Q1 356 aaKnown RBP19.24■□□□□ 0.67
SMPD1-204ENST00000530395 SLC24A3Q9HC58 644 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 ZNF358Q9NW07 568 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 QPCTLQ9NXS2 382 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 XPR1Q9UBH6 696 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 TNFRSF10DQ9UBN6 386 aa19.24■□□□□ 0.67
SMPD1-204ENST00000530395 CHCHD2Q9Y6H1 151 aaPredicted RBP19.24■□□□□ 0.67
SMPD1-204ENST00000530395 WASHC1A8K0Z3 465 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 TP53I11O14683 189 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 URI1O94763 535 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-204ENST00000530395 HOXD4P09016 255 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-204ENST00000530395 GLI4P10075 376 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 COL6A2P12110 1019 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 GABRA1P14867 456 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 MAGEA12P43365 314 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 ZFP36L2P47974 494 aaKnown RBP19.23■□□□□ 0.67
SMPD1-204ENST00000530395 NTRK2Q16620 822 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 C1orf185Q5T7R7 199 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 CLYBLQ8N0X4 340 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 LRRC25Q8N386 305 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-204ENST00000530395 JSRP1Q96MG2 331 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-204ENST00000530395 PAFAH2Q99487 392 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 CXorf21Q9HAI6 301 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 TEX10Q9NXF1 929 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-204ENST00000530395 ADAM29Q9UKF5 820 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 PCTPQ9UKL6 214 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 FAM215AQ9Y5M1 114 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 EXPH5Q8NEV8 1989 aa19.23■□□□□ 0.67
SMPD1-204ENST00000530395 CLPSP04118 112 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 POU3F2P20265 443 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-204ENST00000530395 CNTFP26441 200 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 SSTR4P31391 388 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 TMED10P49755 219 aaKnown RBP19.22■□□□□ 0.67
SMPD1-204ENST00000530395 TRAF3Q13114 568 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 RPS6KA2Q15349 733 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 GGTA1PQ4G0N0 100 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 UBAP2Q5T6F2 1119 aaKnown RBP19.22■□□□□ 0.67
SMPD1-204ENST00000530395 DMRTC2Q8IXT2 367 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-204ENST00000530395 OR4K14Q8NGD5 310 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 DIO2Q92813 273 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 TP53INP1Q96A56 240 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 ZNF597Q96LX8 424 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 FMO2Q99518 471 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 ELOVL6Q9H5J4 265 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 ALKBH4Q9NXW9 302 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 SPRR3Q9UBC9 169 aa19.22■□□□□ 0.67
SMPD1-204ENST00000530395 CNOT11Q9UKZ1 510 aaKnown RBP19.22■□□□□ 0.67
SMPD1-204ENST00000530395 FREM3P0C091 2139 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 HIVEP1P15822 2718 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 LRRC3CA6NJW4 275 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 PGRMC2O15173 223 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 GUCY1B2O75343 617 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 KLK1P06870 262 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 RFPL3SP0C7P2 107 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 NRG3P56975 720 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 RPP38P78345 283 aaKnown RBP19.21■□□□□ 0.67
SMPD1-204ENST00000530395 CCNYL2Q5T2Q4 361 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 TMEM198Q66K66 360 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 RTL6Q6ICC9 239 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 MILR1Q7Z6M3 343 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 ZNF441Q8N8Z8 693 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 MYRIPQ8NFW9 859 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 IFT81Q8WYA0 676 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 UCN3Q969E3 161 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 C16orf45Q96MC5 204 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-204ENST00000530395 NSUN5Q96P11 429 aaKnown RBP19.21■□□□□ 0.67
SMPD1-204ENST00000530395 MRPL57Q9BQC6 102 aaKnown RBP19.21■□□□□ 0.67
SMPD1-204ENST00000530395 ZNF559Q9BR84 538 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 PROK2Q9HC23 129 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 ACKR4Q9NPB9 350 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 KCNN3Q9UGI6 736 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 PCDHGB3Q9Y5G1 929 aa19.21■□□□□ 0.67
SMPD1-204ENST00000530395 A0A0G2JNJ9 132 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 ANKRD33BA6NCL7 494 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 POC1B-GALNT4F8VUJ3 575 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 LRATO95237 230 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 OTCP00480 354 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms