RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 ERVK-11Q9UQG0 969 aa13.36□□□□□ -0.27
NXF1-204ENST00000527064 NTNG1Q9Y2I2 539 aa13.36□□□□□ -0.27
NXF1-204ENST00000527064 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
NXF1-204ENST00000527064 CCL27Q9Y4X3 112 aa13.36□□□□□ -0.27
NXF1-204ENST00000527064 POLR3HQ9Y535 204 aaPredicted RBP13.36□□□□□ -0.27
NXF1-204ENST00000527064 PTGDR2Q9Y5Y4 395 aa13.36□□□□□ -0.27
NXF1-204ENST00000527064 GCN1Q92616 2671 aaKnown RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 TMEM233B4DJY2 109 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 TCP11X1B4DZS4 312 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 HRKO00198 91 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 PIP5K1BO14986 540 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 NME2P1O60361 137 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 LINC00032P0C843 101 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 EDN3P14138 238 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 NME2P22392 152 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 FEN1P39748 380 aaKnown RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 SLC18A1P54219 525 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 SLC37A1P57057 533 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 ABCE1P61221 599 aaKnown RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 MAGOHP61326 146 aaKnown RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 FUT7Q11130 342 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 OPN5Q6U736 354 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 DND1Q8IYX4 353 aaKnown RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 SLC15A4Q8N697 577 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 ANKRD42Q8N9B4 389 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 ST6GALNAC3Q8NDV1 305 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 EXOSC8Q96B26 276 aaKnown RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 ZBTB9Q96C00 473 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 CNRIP1Q96F85 164 aaPredicted RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 PPP3R2Q96LZ3 170 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 GAL3ST4Q96RP7 486 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 PAIP2Q9BPZ3 127 aaKnown RBP13.35□□□□□ -0.27
NXF1-204ENST00000527064 BRINP2Q9C0B6 783 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 WWTR1Q9GZV5 400 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 TUBB1Q9H4B7 451 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 CFL2Q9Y281 166 aa13.35□□□□□ -0.27
NXF1-204ENST00000527064 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
NXF1-204ENST00000527064 A0A1W2PS29 197 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 LSM1O15116 133 aaKnown RBP13.34□□□□□ -0.27
NXF1-204ENST00000527064 MAPK1P28482 360 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 SOX3P41225 446 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 ST13P50502 369 aaKnown RBP13.34□□□□□ -0.27
NXF1-204ENST00000527064 RPL38P63173 70 aaKnown RBP13.34□□□□□ -0.27
NXF1-204ENST00000527064 C2orf80Q0P641 193 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 MAP4K2Q12851 820 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 KIAA0040Q15053 153 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 EBPQ15125 230 aaKnown RBP13.34□□□□□ -0.27
NXF1-204ENST00000527064 MAPKAPK3Q16644 382 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 ZNF750Q32MQ0 723 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 GALNTL6Q49A17 601 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 HLA-DQA1Q5Y7H0 255 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 FAM71E1Q6IPT2 247 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 Q6ZSR9 355 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 GALNTL5Q7Z4T8 443 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 TAGAPQ8N103 731 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 OR2T11Q8NH01 316 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 NR4A3Q92570 626 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 TLCD1Q96CP7 247 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 ERP27Q96DN0 273 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 SGCZQ96LD1 299 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 ZNF681Q96N22 645 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 TAAR6Q96RI8 345 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 SLX1AQ9BQ83 275 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 OR10A5Q9H207 317 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 LIN28AQ9H9Z2 209 aaKnown RBP13.34□□□□□ -0.27
NXF1-204ENST00000527064 SLC35C2Q9NQQ7 365 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 ZDHHC2Q9UIJ5 367 aa13.34□□□□□ -0.27
NXF1-204ENST00000527064 C2orf92A0A1B0GVN3 265 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 ASPDHA6ND91 283 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 ANKUB1A6NFN9 424 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 BCAS2O75934 225 aaPredicted RBP13.33□□□□□ -0.28
NXF1-204ENST00000527064 SLITRK5O94991 958 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 OR6B1O95007 311 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 CLPSP04118 112 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 CT62P0C5K7 136 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 DDX5P17844 614 aaKnown RBP13.33□□□□□ -0.28
NXF1-204ENST00000527064 BGNP21810 368 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 GNLYP22749 145 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 NTSP30990 170 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 SSTR4P31391 388 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 ARRB2P32121 409 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 MPIP34949 423 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 SLC1A6P48664 564 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 MPP2Q14168 576 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 CEBPEQ15744 281 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 PRICKLE4Q2TBC4 344 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 ATP6AP1LQ52LC2 224 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 XKR7Q5GH72 579 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 PIGGQ5H8A4 983 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 AGBL2Q5U5Z8 902 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 IL20RBQ6UXL0 311 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 C16orf47Q6ZP98 133 aaPredicted RBP13.33□□□□□ -0.28
NXF1-204ENST00000527064 RTL4Q6ZR62 310 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 ZNF227Q86WZ6 799 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 TICAM1Q8IUC6 712 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms