RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 GPR65Q8IYL9 337 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 CADM2Q8N3J6 435 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 CHDHQ8NE62 594 aaPredicted RBP1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 RMDN2Q96LZ7 410 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 ST6GALNAC5Q9BVH7 336 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 CCSER1Q9C0I3 900 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 WDR35Q9P2L0 1181 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 CFDP1Q9UEE9 299 aaPredicted RBP1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 SNX7Q9UNH6 387 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 PDE10AQ9Y233 779 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 TMED7Q9Y3B3 224 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 WSB1Q9Y6I7 421 aa1.34□□□□□ -2.19
ECHDC1-219ENST00000526299 ACEP12821 1306 aa1.34□□□□□ -2.2
ECHDC1-219ENST00000526299 GTF3C1Q12789 2109 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 A0A0B4J203 849 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 FCGR3BO75015 233 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 TBX10O75333 385 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 CLN5O75503 358 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 GFPT2O94808 682 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 CENPBP07199 599 aaPredicted RBP1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 CYP11B1P15538 503 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 CPT2P23786 658 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 GJB2P29033 226 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 PTPN4P29074 926 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 EEF1DP29692 281 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 MTIF2P46199 727 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 OR3A1P47881 315 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 IFI35P80217 286 aaPredicted RBP1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 TOMM20Q15388 145 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 LY6EQ16553 131 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 KRT80Q6KB66 452 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 TMEM61Q8N0U2 210 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 PNPLA2Q96AD5 504 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 TADA1Q96BN2 335 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 PCED1BQ96HM7 432 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 CNDP2Q96KP4 475 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 RAB40CQ96S21 281 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 AP1M1Q9BXS5 423 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 ELOVL4Q9GZR5 314 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 RABEP2Q9H5N1 569 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 PFDN4Q9NQP4 134 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 NKIRAS2Q9NYR9 191 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 CACNG2Q9Y698 323 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 PASKQ96RG2 1323 aa1.33□□□□□ -2.2
ECHDC1-219ENST00000526299 A0A0U1RQG5 324 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 KIR2DS1A0A191URI9 304 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ANKDD1BA6NHY2 528 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 M0R296 226 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 PSMA7O14818 248 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 PLOD3O60568 738 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ICOSLGO75144 302 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 CSDE1O75534 798 aaKnown RBP1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ANXA9O76027 345 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 FYNP06241 537 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 MYBL1P10243 752 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 GABRR1P24046 479 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 KRT20P35900 424 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 RAD52P43351 418 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 RPS10P46783 165 aaKnown RBP1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 KIR2DS1Q14954 304 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 SBK1Q52WX2 424 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 TCP11X2Q5H9J9 407 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 MS4A13Q5J8X5 152 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ERMARDQ5T6L9 678 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ASPHD2Q6ICH7 369 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 PPP1R21Q6ZMI0 780 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 IL34Q6ZMJ4 242 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ENOSF1Q7L5Y1 443 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 PHLDB2Q86SQ0 1253 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 LRP11Q86VZ4 500 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 OR8H2Q8N162 312 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ERP27Q96DN0 273 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 DHTKD1Q96HY7 919 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 SPATA17Q96L03 361 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 BAG1Q99933 345 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 SLF1Q9BQI6 1058 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 BCCIPQ9P287 314 aaKnown RBP eCLIP1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 ARHGAP21Q5T5U3 1957 aa1.32□□□□□ -2.2
ECHDC1-219ENST00000526299 TRBV6-6A0A0A6YYG2 114 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 FAM170AA1A519 330 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 URADA6NGE7 173 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 P4HA2O15460 535 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 AHCYL1O43865 530 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 DKC1O60832 514 aaKnown RBP eCLIP1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 TBCAO75347 108 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 MMP23AO75900 390 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 IGLV3-19P01714 112 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 APOA4P06727 396 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 ALPIP09923 528 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 NR2F1P10589 423 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 EZRP15311 586 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 UGT1A3P35503 534 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 FKBP1BP68106 108 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 EGFEM1PQ0D2K5 195 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 GLYR1Q49A26 553 aaPredicted RBP1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 SPOUT1Q5T280 376 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 DCAF12Q5T6F0 453 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 ANKRD46Q86W74 232 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 TICAM2Q86XR7 235 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms