RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ELP4Q96EB1 424 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 SCRN2Q96FV2 425 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 MCCC1Q96RQ3 725 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 RIOK2Q9BVS4 552 aaKnown RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 SLCO5A1Q9H2Y9 848 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 ANKRD10Q9NXR5 420 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 IL1RAPL1Q9NZN1 696 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 ATXN10Q9UBB4 475 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 UBA2Q9UBT2 640 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 C3orf18Q9UK00 162 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 FBXO9Q9UK97 447 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 WDR37Q9Y2I8 494 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 DMRT1Q9Y5R6 373 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 MALRD1Q5VYJ5 2156 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 LOC102723996A0A087X1L8 192 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 A0A1W2PPH5 198 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 TCRBV7S3A2A0A539 114 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 GABRR3A8MPY1 467 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 PDE9AO76083 593 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 HLA-DQA2P01906 255 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 GABRA1P14867 456 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 VCLP18206 1134 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 POLR2CP19387 275 aaPredicted RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 HLA-DPA1P20036 260 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 TYK2P29597 1187 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 ACVR1BP36896 505 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 SOX2P48431 317 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 MTTPP55157 894 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 MLF1P58340 268 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 NANOS3P60323 173 aaKnown RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 TUBA4AP68366 448 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 OC90Q02509 493 aaPredicted RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 EEF1A2Q05639 463 aaKnown RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 CUL2Q13617 745 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 FASTKQ14296 549 aaKnown RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 SEC23BQ15437 767 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 RPE65Q16518 533 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 TSTQ16762 297 aaKnown RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 ME3Q16798 604 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 KNOP1Q1ED39 458 aaKnown RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 KRT39Q6A163 491 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 FAM166AQ6J272 317 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 KDELC1Q6UW63 502 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 KLBQ86Z14 1044 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 OR52N4Q8NGI2 321 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 OSR1Q8TAX0 266 aaPredicted RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 CNOT9Q92600 299 aaKnown RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 SEMA4DQ92854 862 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 IMMP1LQ96LU5 166 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 C7orf26Q96N11 449 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 SMC6Q96SB8 1091 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 NPY6RQ99463 290 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 TUBB6Q9BUF5 446 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 TM2D2Q9BX73 214 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 FAM207AQ9NSI2 230 aaPredicted RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 PPP1R14DQ9NXH3 145 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 C6orf203Q9P0P8 240 aaPredicted RBP6.31□□□□□ -1.4
NEDD8-203ENST00000524927 NDRG3Q9UGV2 375 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 SLC24A2Q9UI40 661 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 DHDHQ9UQ10 334 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 NFS1Q9Y697 457 aa6.31□□□□□ -1.4
NEDD8-203ENST00000524927 COL7A1Q02388 2944 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 YLPM1P49750 1951 aaKnown RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 GTPBP10A4D1E9 387 aaKnown RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 KLRC4O43908 158 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 KIAA0513O60268 411 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 KCNJ13O60928 360 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 SOCS5O75159 536 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 DAB1O75553 588 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 PLAUP00749 431 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 GTF2H1P32780 548 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 RGRP47804 291 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 CCR9P51686 369 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 YBEYP58557 167 aaPredicted RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 AP1S1P61966 158 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 MEA1Q16626 185 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 TTI2Q6NXR4 508 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 PHLDB2Q86SQ0 1253 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 TSPAN33Q86UF1 283 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 ZFP62Q8NB50 900 aaPredicted RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 FBXL13Q8NEE6 735 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 KAT2AQ92830 837 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 MRPL24Q96A35 216 aaKnown RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 NTNG2Q96CW9 530 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 PIK3IP1Q96FE7 263 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 ART5Q96L15 291 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 WDR83Q9BRX9 315 aaKnown RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 RHNO1Q9BSD3 238 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 RBM4Q9BWF3 364 aaKnown RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 GATA5Q9BWX5 397 aaPredicted RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 OR2AG1Q9H205 316 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 FAM60AQ9NP50 221 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 RAB20Q9NX57 234 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 UPB1Q9UBR1 384 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 TRIM10Q9UDY6 481 aa6.3□□□□□ -1.4
NEDD8-203ENST00000524927 KLF13Q9Y2Y9 288 aaPredicted RBP6.3□□□□□ -1.4
NEDD8-203ENST00000524927 GOLGA6L10A0A0M3HER8 536 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 C2orf81A6NN90 581 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms