RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 CDC42EP4Q9H3Q1 356 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 ZFP64Q9NPA5 681 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 QPCTLQ9NXS2 382 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF180Q9UJW8 692 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 PCTPQ9UKL6 214 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 SNX6Q9UNH7 406 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 RNF6Q9Y252 685 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 CFL2Q9Y281 166 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 RNF11Q9Y3C5 154 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 ASB4Q9Y574 426 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 SETD2Q9BYW2 2564 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 PDZD2O15018 2839 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 GTF3C1Q12789 2109 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF407Q9C0G0 2248 aa8.18□□□□□ -1.1
CTNNA1-240ENST00000523912 TACC2O95359 2948 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 A0A1B0GVC2 190 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 C2orf92A0A1B0GVN3 265 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 EXOC1LA0A1B0GW35 172 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 CCDC151A5D8V7 595 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 LRRC14BA6NHZ5 514 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 C19orf84I3L1E1 186 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 OR7A17O14581 309 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 CDH16O75309 829 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 PRKRAO75569 313 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 GABRA1P14867 456 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 TAC1P20366 129 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 NT5EP21589 574 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 PIGAP37287 484 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 MAGEA12P43365 314 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 KIR3DL1P43629 444 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 MASP1P48740 699 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 SLC37A1P57057 533 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 NUP107P57740 925 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 TLE4Q04727 773 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 PMPCAQ10713 525 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 FOXO1Q12778 655 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 RPS6KA2Q15349 733 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 CCNYL2Q5T2Q4 361 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 C1orf185Q5T7R7 199 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 PRAMEF20Q5VT98 475 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 TMEM198Q66K66 360 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 MILR1Q7Z6M3 343 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 LCA5Q86VQ0 697 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 CLYBLQ8N0X4 340 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 MARVELD2Q8N4S9 558 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 OR7G1Q8NGA0 311 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 OR10G3Q8NGC4 313 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 OR52B6Q8NGF0 335 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 LILRB4Q8NHJ6 448 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 DIO2Q92813 273 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 TP53INP1Q96A56 240 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 MTBPQ96DY7 904 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 DTNBP1Q96EV8 351 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 LRRC46Q96FV0 321 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 SECISBP2Q96T21 854 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 TREX2Q9BQ50 279 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 NTMT1Q9BV86 223 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF703Q9H7S9 590 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 SH2D2AQ9NP31 389 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 PNPLA3Q9NST1 481 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 TUBA8Q9NY65 449 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 PSME2Q9UL46 239 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 SLC12A4Q9UP95 1085 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 STK38LQ9Y2H1 464 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 LIPGQ9Y5X9 500 aa8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 INTS1Q8N201 2190 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-240ENST00000523912 C15orf38-AP3S2A0A0A6YYH1 394 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 TRIM49D1C9J1S8 452 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 POC1B-GALNT4F8VUJ3 575 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 HRKO00198 91 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF354AO60765 605 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 SNX4O95219 450 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 NADKO95544 446 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 KRT6AP02538 564 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 GBAP04062 536 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 KRT6BP04259 564 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 KLK1P06870 262 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 RPS17P08708 135 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 ABHD2P08910 425 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 SNRPAP09012 282 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 CPMP14384 443 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 GDF1P27539 372 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 MSX1P28360 303 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 PEX19P40855 299 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 KRT6CP48668 564 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 XKP51811 444 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 NR0B1P51843 470 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 TRAF3Q13114 568 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 SF3B4Q15427 424 aaKnown RBP eCLIP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 CDSNQ15517 529 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 NTRK2Q16620 822 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 SLC25A35Q3KQZ1 300 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 SGO1Q5FBB7 561 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 DGAT2L6Q6ZPD8 337 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 COMMD6Q7Z4G1 85 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 CDH24Q86UP0 819 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms