RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 MLYCDO95822 493 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SYF2O95926 243 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 FTCDO95954 541 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 APRTP07741 180 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ICAM2P13598 275 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ETS1P14921 441 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 PSMA3P25788 255 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 EEF1DP29692 281 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 PRKAR1BP31321 381 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 FMO4P31512 558 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SLC26A3P40879 764 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 BUD31P41223 144 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 AVPR1BP47901 424 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 TTPAP49638 278 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 EFNA3P52797 238 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ITGA8P53708 1063 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 TERF1P54274 439 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 AP2B1P63010 937 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 CRADDP78560 199 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ACTN3Q08043 901 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SNX1Q13596 522 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 OR1C1Q15619 314 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 MAPKAPK3Q16644 382 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ANKRD20A4Q4UJ75 823 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 CTSL3PQ5NE16 218 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ACER2Q5QJU3 275 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SPINK14Q6IE38 97 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 CES3Q6UWW8 571 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 MEX3BQ6ZN04 569 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 PEX26Q7Z412 305 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 CPEB2Q7Z5Q1 589 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 DTX2Q86UW9 622 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 PAQR7Q86WK9 346 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 MYLK4Q86YV6 388 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 UBL4BQ8N7F7 174 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 TC2NQ8N9U0 490 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 VPS37AQ8NEZ2 397 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 TOR1AIP2Q8NFQ8 470 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 OR9A1PQ8NGU1 263 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 OR9A4Q8NGU2 314 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 MAGEC3Q8TD91 643 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ADAMTS18Q8TE60 1221 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 AGAP11Q8TF27 550 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 CA5BP1Q8WTZ4 195 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SMPDL3AQ92484 453 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SDCCAG3Q96C92 435 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 TMEM41AQ96HV5 264 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 IMMP1LQ96LU5 166 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 ZNF354BQ96LW1 612 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 GPR137Q96N19 417 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SIGLEC12Q96PQ1 595 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 MACROD1Q9BQ69 325 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 UTP23Q9BRU9 249 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 VN1R1Q9GZP7 353 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 DRC3Q9H069 523 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 CHRAC1Q9NRG0 131 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 SPATA7Q9P0W8 599 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 HCN3Q9P1Z3 774 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 C19orf25Q9UFG5 118 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 AMFRQ9UKV5 643 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 MEMO1Q9Y316 297 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 PCM1Q15154 2024 aa4.92□□□□□ -1.62
CTNNA1-239ENST00000523685 PDZD2O15018 2839 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ADGRG4Q8IZF6 3080 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 LOC102723996A0A087X1L8 192 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 IGKV1-8A0A0C4DH67 115 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ERI2A8K979 691 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 GABRR3A8MPY1 467 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ARHGEF33A8MVX0 844 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 E5RI56 91 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 SGK494L7N484 410 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 HAT1O14929 419 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ASNA1O43681 348 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 PEX1O43933 1283 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CDC123O75794 336 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CCNDBP1O95273 360 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 VAPBO95292 243 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 F7P08709 466 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 PKMP14618 531 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 IL1RNP18510 177 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CAPN3P20807 821 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 NMBRP28336 390 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 FDFT1P37268 417 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 XCR1P46094 333 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 PNLIPRP1P54315 467 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 KRTAP10-2P60368 255 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CSNK1G2P78368 415 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ACVR1Q04771 509 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 TBX2Q13207 712 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CCNIQ14094 377 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 NAA25Q14CX7 972 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 NDUFA9Q16795 377 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 MEP1AQ16819 746 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 KCTD19Q17RG1 926 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 KLHL38Q2WGJ6 581 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 KRTCAP3Q53RY4 240 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 SFT2D3Q587I9 215 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ACSBG2Q5FVE4 666 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms