RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 EPB42P16452 691 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 SSTR4P31391 388 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 GCKP35557 465 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 KCNC1P48547 511 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 SRSF2Q01130 221 aaKnown RBP10.58□□□□□ -0.72
SDCBP-211ENST00000523441 SLAMF1Q13291 335 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 DDX39BQ13838 428 aaKnown RBP10.58□□□□□ -0.72
SDCBP-211ENST00000523441 SETDB1Q15047 1291 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 EBPQ15125 230 aaKnown RBP10.58□□□□□ -0.72
SDCBP-211ENST00000523441 TSNQ15631 228 aaKnown RBP10.58□□□□□ -0.72
SDCBP-211ENST00000523441 PPP1R3AQ16821 1122 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 AP5B1Q2VPB7 878 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 VWA1Q6PCB0 445 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 C20orf204Q6ZNR8 217 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 UBE3DQ7Z6J8 389 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 TRIM42Q8IWZ5 723 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 SPPL2AQ8TCT8 520 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 EXT2Q93063 718 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 CFAP36Q96G28 342 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 FBXL20Q96IG2 436 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 SIGLEC10Q96LC7 697 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 KCNC2Q96PR1 638 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 GSX2Q9BZM3 304 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 KLHL4Q9C0H6 718 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 UBQLN3Q9H347 655 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 RPF2Q9H7B2 306 aaKnown RBP10.58□□□□□ -0.72
SDCBP-211ENST00000523441 METTL7AQ9H8H3 244 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 LYRM4Q9HD34 91 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.58□□□□□ -0.72
SDCBP-211ENST00000523441 WWOXQ9NZC7 414 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF490Q9ULM2 529 aaPredicted RBP10.58□□□□□ -0.72
SDCBP-211ENST00000523441 VWA7Q9Y334 891 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 A0A1W2PNV4 684 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 SYNDIG1LA6NDD5 238 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 PLAUP00749 431 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 MLNP12872 115 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 POU2F1P14859 743 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 PGAM1P18669 254 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 KRT15P19012 456 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 CRYGSP22914 178 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 HPDP32754 393 aaPredicted RBP10.57□□□□□ -0.72
SDCBP-211ENST00000523441 CD79BP40259 229 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 MC3RP41968 323 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 CASP3P42574 277 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 HSPA7P48741 367 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 DOC2AQ14183 400 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 CLEC12BQ2HXU8 276 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 EXOC3L2Q2M3D2 409 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 ADPRMQ3LIE5 342 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 TBCELQ5QJ74 424 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 TTC27Q6P3X3 843 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 DRICH1Q6PGQ1 229 aaPredicted RBP10.57□□□□□ -0.72
SDCBP-211ENST00000523441 UBQLNLQ8IYU4 475 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 DND1Q8IYX4 353 aaKnown RBP10.57□□□□□ -0.72
SDCBP-211ENST00000523441 TXLNBQ8N3L3 684 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 SPATA6LQ8N4H0 392 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 ZPLD1Q8TCW7 415 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 RIT1Q92963 219 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 UCN3Q969E3 161 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 PGM2Q96G03 612 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 ANGPTL4Q9BY76 406 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 PHACTR1Q9C0D0 580 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 OR51B5Q9H339 312 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 PIGMQ9H3S5 423 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 GALNT9Q9HCQ5 603 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 EHD3Q9NZN3 535 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 CTNNAL1Q9UBT7 734 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 ROS1P08922 2347 aa10.57□□□□□ -0.72
SDCBP-211ENST00000523441 CAPN14A8MX76 684 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 PRAMEF4O60810 478 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 SNX4O95219 450 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 TGM6O95932 706 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 ACTL6AO96019 429 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 HIST1H1TP22492 207 aaPredicted RBP10.56□□□□□ -0.72
SDCBP-211ENST00000523441 PTPN6P29350 595 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 RAP1GDS1P52306 607 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 SLC37A1P57057 533 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 RPS13P62277 151 aaKnown RBP10.56□□□□□ -0.72
SDCBP-211ENST00000523441 NHSL2Q5HYW2 709 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 PRAMEF9Q5VWM5 478 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 HEPHL1Q6MZM0 1159 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 FAM45BPQ6NSW5 357 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 PPP4R4Q6NUP7 873 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 BTLAQ7Z6A9 289 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 MEIOBQ8N635 442 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 BBOF1Q8ND07 529 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 FAM45AQ8TCE6 357 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 MAIP1Q8WWC4 291 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 RHBDF1Q96CC6 855 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 TBCDQ9BTW9 1192 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 ROGDIQ9GZN7 287 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 CXorf56Q9H5V9 222 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 DNAJC11Q9NVH1 559 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 KLRF1Q9NZS2 232 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 ADGRE2Q9UHX3 823 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 OARD1Q9Y530 152 aa10.56□□□□□ -0.72
SDCBP-211ENST00000523441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
SDCBP-211ENST00000523441 UQCRHLA0A096LP55 91 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 A0A1W2PS29 197 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms