RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 NUDT11Q96G61 164 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 SENP5Q96HI0 755 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF778Q96MU6 729 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 HBEGFQ99075 208 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 KXD1Q9BQD3 176 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CPPED1Q9BRF8 314 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 DDA1Q9BW61 102 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 SPATA9Q9BWV2 254 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 SLITRK2Q9H156 845 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 VCX2Q9H322 139 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 AUNIPQ9H7T9 357 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 NOL11Q9H8H0 719 aaKnown RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 IL21RQ9HBE5 538 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ANKHQ9HCJ1 492 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 LTB4R2Q9NPC1 389 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 GDF3Q9NR23 364 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CHRAC1Q9NRG0 131 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 MCUBQ9NWR8 336 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM160Q9NX00 188 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 COPZ2Q9P299 210 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PISDQ9UG56 409 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CHRNA9Q9UGM1 479 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PURGQ9UJV8 347 aaKnown RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 OR52A1Q9UKL2 312 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 UTS2RQ9UKP6 389 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 COL4A2P08572 1712 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PTPRDP23468 1912 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 VPS13AQ96RL7 3174 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SAGE2PA6NJ88 616 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MAGEB17A8MXT2 336 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 ANKRD63C9JTQ0 380 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PSMD12O00232 456 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 GRID2O43424 1007 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 LIASO43766 372 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 HCN1O60741 890 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 B4GALT2O60909 372 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 UGT2B11O75310 529 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 UGT2B17O75795 530 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 DKK1O94907 266 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 UGT2B4P06133 528 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MMP2P08253 660 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 FAM58BPP0C7Q3 252 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 GABRR1P24046 479 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 FCARP24071 287 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 OTX2P32243 289 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MAS1LP35410 378 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 HPCAL1P37235 193 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CSKP41240 450 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MMP13P45452 471 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 GABRA4P48169 554 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 KCNJ3P48549 501 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 UGT2B15P54855 530 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 RGS8P57771 180 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 TFAMQ00059 246 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 IL9RQ01113 521 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MEF2AQ02078 507 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 RPL6Q02878 288 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 TGM3Q08188 693 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 FGL1Q08830 312 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 INCA1Q0VD86 236 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 GALNT2Q10471 571 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CNTN1Q12860 1018 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 BIKQ13323 160 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PWP1Q13610 501 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SLC17A1Q14916 467 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 UBXN2BQ14CS0 331 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 LRRC14Q15048 493 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 RPS6KA1Q15418 735 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MED22Q15528 200 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SNAPC1Q16533 368 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MICAQ29983 383 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MGAT5BQ3V5L5 792 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 AKIRIN2Q53H80 203 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 ZRANB3Q5FWF4 1079 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 FAM78AQ5JUQ0 283 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CLLU1Q5K131 121 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SPANXN2Q5MJ10 180 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 DCST1Q5T197 706 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CARD17Q5XLA6 110 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM270Q6UE05 265 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CLEC9AQ6UXN8 241 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 KYAT3Q6YP21 454 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PXKQ7Z7A4 578 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 GALNT10Q86SR1 603 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PEG10Q86TG7 708 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SYVN1Q86TM6 617 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 NOXA1Q86UR1 476 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MOGAT3Q86VF5 341 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 C17orf78Q8N4C9 275 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SLC15A4Q8N697 577 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 FITM2Q8N6M3 262 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SEMA6DQ8NFY4 1073 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 KBTBD8Q8NFY9 601 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PCDH19Q8TAB3 1148 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 FEZF2Q8TBJ5 459 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 LRRC15Q8TF66 581 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PHYHIPQ92561 330 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CLDN23Q96B33 292 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 ISOC1Q96CN7 298 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms