RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PSMA6P60900 246 aaKnown RBP15.46■□□□□ 0.07
USP42-207ENST00000521713 TDGQ13569 410 aa15.46■□□□□ 0.07
USP42-207ENST00000521713 PUM1Q14671 1186 aaKnown RBP eCLIP15.46■□□□□ 0.077e-13■■■■□ 24.3
USP42-207ENST00000521713 METTL2BQ6P1Q9 378 aaKnown RBP15.46■□□□□ 0.07
USP42-207ENST00000521713 PNCKQ6P2M8 343 aa15.46■□□□□ 0.07
USP42-207ENST00000521713 HSH2DQ96JZ2 352 aa15.46■□□□□ 0.07
USP42-207ENST00000521713 SMURF1Q9HCE7 757 aa15.46■□□□□ 0.07
USP42-207ENST00000521713 HEBP1Q9NRV9 189 aa15.46■□□□□ 0.07
USP42-207ENST00000521713 GIMAP2Q9UG22 337 aa15.46■□□□□ 0.07
USP42-207ENST00000521713 KLF15Q9UIH9 416 aa15.46■□□□□ 0.07
USP42-207ENST00000521713 MYH14Q7Z406 1995 aaKnown RBP15.46■□□□□ 0.06
USP42-207ENST00000521713 LRRN3E7EW58 273 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ARHGEF15O94989 841 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 HK1P19367 917 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 CTBP2P56545 445 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 GBX1Q14549 363 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 TRAM2Q15035 370 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 COQ5Q5HYK3 327 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ANKRD54Q6NXT1 300 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 TTLL10Q6ZVT0 673 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ZNF675Q8TD23 568 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 LRRN3Q9H3W5 708 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ARNT2Q9HBZ2 717 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 B4GALT7Q9UBV7 327 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ZFR2Q9UPR6 939 aaKnown RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 ACTL7AQ9Y615 435 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 A0A1W2PRQ8 180 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 SDC3O75056 442 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 TIMP2P16035 220 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 CD6P30203 668 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 HLA-FP30511 346 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 MLLT1Q03111 559 aaPredicted RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 KCNAB2Q13303 367 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 DSG2Q14126 1118 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 CYBRD1Q53TN4 286 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 PRPF38BQ5VTL8 546 aaKnown RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 PYHIN1Q6K0P9 492 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ARMC10Q8N2F6 343 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 PROKR2Q8NFJ6 384 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 OR6N1Q8NGY5 312 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 HUS1BQ8NHY5 278 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ZFYVE21Q9BQ24 234 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 NLGN3Q9NZ94 848 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 NRAPQ86VF7 1730 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 GFRA2O00451 464 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ABLIM3O94929 683 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 HOXD9P28356 352 aaPredicted RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 AP2S1P53680 142 aaPredicted RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 MPP2Q14168 576 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 OR4C11Q6IEV9 310 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 ARFGAP1Q8N6T3 406 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 GPR26Q8NDV2 337 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 NUP43Q8NFH3 380 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 PRKYO43930 277 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 SLC16A8O95907 504 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 HTR2AP28223 471 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 P2RY2P41231 377 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 SLC6A11P48066 632 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 RAB5BP61020 215 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 TRAM1Q15629 374 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 HSF5Q4G112 596 aaPredicted RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 TMEM240Q5SV17 173 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 FUBP1Q96AE4 644 aaKnown RBP15.45■□□□□ 0.06
USP42-207ENST00000521713 RBP7Q96R05 134 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 MCHR1Q99705 422 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 HCN4Q9Y3Q4 1203 aa15.45■□□□□ 0.06
USP42-207ENST00000521713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.44■□□□□ 0.06
USP42-207ENST00000521713 TMX2-CTNND1H3BSU7 103 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 PER3P56645 1201 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 GRIN2CQ14957 1233 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 RABL3Q5HYI8 236 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 CLEC12AQ5QGZ9 265 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 LHFPL3Q86UP9 236 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 RAB8BQ92930 207 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 TMEM74Q96NL1 305 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 DUSP23Q9BVJ7 150 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 ANKRD60Q9BZ19 345 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 MEAF6Q9HAF1 191 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 CHMP1AQ9HD42 196 aaPredicted RBP15.44■□□□□ 0.06
USP42-207ENST00000521713 AIG1Q9NVV5 245 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 MGAT4BQ9UQ53 548 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 NUMBLQ9Y6R0 609 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 CDC123O75794 336 aaPredicted RBP15.44■□□□□ 0.06
USP42-207ENST00000521713 GABRA3P34903 492 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 MAGEA6P43360 314 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 KCNJ5P48544 419 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 GALNT1Q10472 559 aaPredicted RBP15.44■□□□□ 0.06
USP42-207ENST00000521713 OR4D1Q15615 310 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 TCEAL6Q6IPX3 200 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 HSD11B1LQ7Z5J1 315 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 ISCA2Q86U28 154 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 IL4I1Q96RQ9 567 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 LPAR4Q99677 370 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 CDH10Q9Y6N8 788 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 MYH7P12883 1935 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 LOC285095A0A1B0GVY8 99 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 PLCXD2Q0VAA5 305 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 KIR2DS3Q14952 304 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 PON3Q15166 354 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms