RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 GPX3P22352 226 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 RPS3P23396 243 aaKnown RBP eCLIP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 ATP5F1P24539 256 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 HOXC13P31276 330 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 CA5AP35218 305 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 VIPR2P41587 438 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 ATP5OP48047 213 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 GSK3BP49841 420 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 RORCP51449 518 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 TKTL1P51854 596 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 KCNK10P57789 538 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 NHLH2Q02577 135 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 TATDN3Q17R31 274 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 EIF2S3LQ2VIR3 472 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 CTU2Q2VPK5 515 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 RNF212Q495C1 297 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 PLA1AQ53H76 456 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 PDZK1Q5T2W1 519 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 RAP1GAP2Q684P5 730 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 PYHIN1Q6K0P9 492 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 ANKRD54Q6NXT1 300 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 TAPT1Q6NXT6 567 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 RTL4Q6ZR62 310 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 EIF3MQ7L2H7 374 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 SLC26A9Q7LBE3 791 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 ZNF367Q7RTV3 350 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 TMPRSS9Q7Z410 1059 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 SPATA19Q7Z5L4 167 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 ZC3HC1Q86WB0 502 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 LRRC56Q8IYG6 542 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 CPXCR1Q8N123 301 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 UXS1Q8NBZ7 420 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 OR1N1Q8NGS0 311 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 MAFAQ8NHW3 353 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 RAB7BQ96AH8 199 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 TMEM125Q96AQ2 219 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 ERMAPQ96PL5 475 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 KCNC2Q96PR1 638 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 NEDD4LQ96PU5 975 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 RIT2Q99578 217 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 EIF2AK1Q9BQI3 630 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 CNPPD1Q9BV87 410 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 SORBS1Q9BX66 1292 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 WDR11Q9BZH6 1224 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 GPR63Q9BZJ6 419 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 PPIL3Q9H2H8 161 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 ELOVL6Q9H5J4 265 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 CHRAC1Q9NRG0 131 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 DNAJC11Q9NVH1 559 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 SDHAF2Q9NX18 166 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 BTRCQ9Y297 605 aa6.29□□□□□ -1.4
CTNNA1-225ENST00000520865 A0A087X1B8 175 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 A0A0G2JPF8 293 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 GLYATL1P3A0A0U1RQE8 302 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 A0A1W2PP18 115 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 ZNF729A6NN14 1252 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 WASHC1A8K0Z3 465 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 A8MV72 311 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 TARM1B6A8C7 271 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 HNRNPCL3B7ZW38 293 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 H0YCG3 227 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 AIPO00170 330 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 CDC7O00311 574 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 AP3D1O14617 1153 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 ANKRD28O15084 1053 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 AKR7A2O43488 359 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 TPST1O60507 370 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 DPM1O60762 260 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 SEC22BO75396 215 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 DHFRP00374 187 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 PGK1P00558 417 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 MT-ND2P03891 347 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 DNTTP04053 509 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 HBQ1P09105 142 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 ACSM4P0C7M7 580 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 HSMCR30P0CW71 290 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 HNRNPCL4P0DMR1 293 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 SAGP10523 405 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 ANXA3P12429 323 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 PEPDP12955 493 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 FOSL2P15408 326 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 CD53P19397 219 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 OXTRP30559 389 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 HOXA13P31271 388 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 ADRA1BP35368 520 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 SERPINF1P36955 418 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 CLCN3P51790 818 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 NR0B1P51843 470 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 AKR1D1P51857 326 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 PGDP52209 483 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 RAG2P55895 527 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 AP1S1P61966 158 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 TSPAN5P62079 268 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 LSM3P62310 102 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 PSMC6P62333 389 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 ERVK-8P63133 956 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 IL5RAQ01344 420 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 TLE2Q04725 743 aa6.28□□□□□ -1.4
CTNNA1-225ENST00000520865 EMX2Q04743 252 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms