RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 RNASET2O00584 256 aaKnown RBP17.36■□□□□ 0.37
SDC2-202ENST00000518385 PCDH7O60245 1069 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 SEMA3DO95025 777 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 ETHE1O95571 254 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 SLC19A1P41440 591 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 CCR8P51685 355 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 PPP2CBP62714 309 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 PPP2CAP67775 309 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 ZNF763Q0D2J5 394 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 SF3B4Q15427 424 aaKnown RBP eCLIP17.36■□□□□ 0.375e-9■□□□□ 9.6
SDC2-202ENST00000518385 IKBIPQ70UQ0 350 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 VTCN1Q7Z7D3 282 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 TSTD1Q8NFU3 115 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 OR4K1Q8NGD4 311 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 GRPEL2Q8TAA5 225 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 FERD3LQ96RJ6 166 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 BHLHE41Q9C0J9 482 aaPredicted RBP17.36■□□□□ 0.37
SDC2-202ENST00000518385 TM7SF3Q9NS93 570 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 CLN6Q9NWW5 311 aa17.36■□□□□ 0.37
SDC2-202ENST00000518385 C1orf226A1L170 272 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 FAM25AB3EWG3 89 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 FAM25CB3EWG5 89 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 FAM25GB3EWG6 89 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 SCO2O43819 266 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 LRATO95237 230 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 ACP5P13686 325 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 DDX5P17844 614 aaKnown RBP17.35■□□□□ 0.37
SDC2-202ENST00000518385 MAT2AP31153 395 aaKnown RBP17.35■□□□□ 0.37
SDC2-202ENST00000518385 HTR3AP46098 478 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 GSTM5P46439 218 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 SEPHS1P49903 392 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 SLC14A1Q13336 389 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 RGNQ15493 299 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 RAB43Q86YS6 212 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 GJD3Q8N144 294 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 SPEM1Q8N4L4 309 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 OR6F1Q8NGZ6 308 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.35■□□□□ 0.37
SDC2-202ENST00000518385 GEMIN6Q8WXD5 167 aaKnown RBP17.35■□□□□ 0.37
SDC2-202ENST00000518385 SH3KBP1Q96B97 665 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 C12orf66Q96MD2 445 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 INSM2Q96T92 566 aaPredicted RBP17.35■□□□□ 0.37
SDC2-202ENST00000518385 TRAF4Q9BUZ4 470 aaPredicted RBP17.35■□□□□ 0.37
SDC2-202ENST00000518385 CHRDQ9H2X0 955 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 TP63Q9H3D4 680 aaPredicted RBP17.35■□□□□ 0.37
SDC2-202ENST00000518385 TMEM38AQ9H6F2 299 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 SLA2Q9H6Q3 261 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 PRM3Q9NNZ6 103 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 MYNNQ9NPC7 610 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 MUTYHQ9UIF7 546 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 SH2B3Q9UQQ2 575 aa17.35■□□□□ 0.37
SDC2-202ENST00000518385 GNG14A0A1W2PPG7 69 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 HMX3A6NHT5 357 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 STK25O00506 426 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 SLC31A1O15431 190 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 TRIM3O75382 744 aaPredicted RBP17.34■□□□□ 0.37
SDC2-202ENST00000518385 APBB3O95704 486 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 CHMP24386 653 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 RAB28P51157 221 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 RIPPLY1Q0D2K3 151 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 ST3GAL4Q11206 333 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 PCM1Q15154 2024 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 UAP1L1Q3KQV9 507 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 TMEM31Q5JXX7 168 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.34■□□□□ 0.37
SDC2-202ENST00000518385 WASH2PQ6VEQ5 465 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 COMMD6Q7Z4G1 85 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 NATD1Q8N6N6 113 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 FAM83FQ8NEG4 500 aaPredicted RBP17.34■□□□□ 0.37
SDC2-202ENST00000518385 OR2L8Q8NGY9 312 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 KIAA1143Q96AT1 154 aaPredicted RBP17.34■□□□□ 0.37
SDC2-202ENST00000518385 CAMK1GQ96NX5 476 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 QRFPRQ96P65 431 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 IL17FQ96PD4 163 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 FEVQ99581 238 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 REEP4Q9H6H4 257 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 ZNF226Q9NYT6 803 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 STUB1Q9UNE7 303 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
SDC2-202ENST00000518385 ANKDD1BA6NHY2 528 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 GABRR3A8MPY1 467 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 CENPXA8MT69 81 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.33■□□□□ 0.37
SDC2-202ENST00000518385 TNFRSF10CO14798 259 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 SEMA4FO95754 770 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 NDUFS1P28331 727 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 EPHA2P29317 976 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 REEP5Q00765 189 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 GPR50Q13585 617 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 LAPTM4AQ15012 233 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 ZNF630Q2M218 657 aaPredicted RBP17.33■□□□□ 0.37
SDC2-202ENST00000518385 TTLQ8NG68 377 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 TPD52L3Q96J77 140 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 KCNC2Q96PR1 638 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 RHNO1Q9BSD3 238 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 TAPBPLQ9BX59 468 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 SMURF1Q9HCE7 757 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 NDUFAF4Q9P032 175 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 TAC3Q9UHF0 121 aa17.33■□□□□ 0.37
SDC2-202ENST00000518385 IQCMA0A1B0GVH7 501 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms