RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SLC5A10A0PJK1 596 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 GSAPA4D1B5 854 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 AGAP5A6NIR3 686 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 SLC9B1P1A6NJY1 282 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CXorf49A8MYA2 514 aaPredicted RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 A8MZ25 164 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 E7ESA3 106 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TMX2-CTNND1H3BSU7 103 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 I3L1I5 382 aaPredicted RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 MYO1CO00159 1063 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 DUX1O43812 170 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 GMFGO60234 142 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 PRAMEF4O60810 478 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CSO75390 466 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 ZNF254O75437 659 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 SCAF4O95104 1147 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 ACSL3O95573 720 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CPNE6O95741 557 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 SYF2O95926 243 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 IL1AP01583 271 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 RPN2P04844 631 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 PROS1P07225 676 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 GSTA2P09210 222 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 NEFHP12036 1026 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CHN1P15882 459 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 KRT4P19013 534 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 EPORP19235 508 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 POLR2CP19387 275 aaPredicted RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 TNFRSF1AP19438 455 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 RPS3P23396 243 aaKnown RBP eCLIP2.62□□□□□ -1.994e-11■■□□□ 12.3
SKP1-204ENST00000517691 NDUFS1P28331 727 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CD1CP29017 333 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 STX2P32856 288 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 FASLGP48023 281 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 LEPRP48357 1165 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 INHBCP55103 352 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CDKN2DP55273 166 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 GPX6P59796 221 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CTXN1P60606 82 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 UBE2IP63279 158 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 PRKAA1Q13131 559 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TSTA3Q13630 321 aaPredicted RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 CBFBQ13951 182 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 SGCBQ16585 318 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TTLL9Q3SXZ7 439 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 KRT71Q3SY84 523 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 PLA1AQ53H76 456 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CRB2Q5IJ48 1285 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 C6orf163Q5TEZ5 329 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 HECTD2Q5U5R9 776 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 STEAP4Q687X5 459 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CAPRIN2Q6IMN6 1127 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 HEPHL1Q6MZM0 1159 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 UGT3A1Q6NUS8 523 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 ZNF549Q6P9A3 640 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 FAM92BQ6ZTR7 304 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 MSANTD1Q6ZTZ1 278 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TMEM26Q6ZUK4 368 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 B3GNT8Q7Z7M8 397 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CUZD1Q86UP6 607 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 C17orf82Q86X59 251 aaPredicted RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 PLXDC1Q8IUK5 500 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 VRK3Q8IV63 474 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CARFQ8N187 725 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 ZCCHC7Q8N3Z6 543 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 C2orf73Q8N5S3 287 aaPredicted RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 ZBTB2Q8N680 514 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 LINC00469Q8N7U9 141 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 RBM15BQ8NDT2 890 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 ACVR1CQ8NER5 493 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 OR5AR1Q8NGP9 310 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 WDR48Q8TAF3 677 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 WDR60Q8WVS4 1066 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 SGCDQ92629 289 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 INPP5DQ92835 1189 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 EXT2Q93063 718 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 FBXL20Q96IG2 436 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 SAMD8Q96LT4 415 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 RMDN2Q96LZ7 410 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TGM7Q96PF1 710 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 GPR21Q99679 349 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TBCDQ9BTW9 1192 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CTDSP1Q9GZU7 261 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 OR52A5Q9H2C5 316 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 SRMSQ9H3Y6 488 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 MVB12BQ9H7P6 319 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 L2HGDHQ9H9P8 463 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 PLAC1Q9HBJ0 212 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 CENPMQ9NSP4 180 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 ZDHHC18Q9NUE0 388 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 LIN7CQ9NUP9 197 aaKnown RBP2.62□□□□□ -1.99
SKP1-204ENST00000517691 POT1Q9NUX5 634 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 FBXO34Q9NWN3 711 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 HRASLS2Q9NWW9 162 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TAS2R13Q9NYV9 303 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 MOCS1Q9NZB8 636 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 TMEM9Q9P0T7 183 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 XPR1Q9UBH6 696 aa2.62□□□□□ -1.99
SKP1-204ENST00000517691 MALT1Q9UDY8 824 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms