RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NPIPB9F8W1W9 429 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SGK494L7N484 410 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 GNGT2O14610 69 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 BCKDKO14874 412 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ADAMDEC1O15204 470 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 UBDO15205 165 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SURF4O15260 269 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 LYRM1O43325 122 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TSPAN2O60636 221 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 HPGDSO60760 199 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRAF2O60831 178 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM20BO75063 409 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ENTPD3O75355 529 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RP2O75695 350 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 AKAP3O75969 853 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RECQL5O94762 991 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 AQP8O94778 261 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 STARD3NLO95772 234 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 IFNA17P01571 189 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NR3C1P04150 777 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 KLK3P07288 261 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 HTR1AP08908 422 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TSPAN19P0C672 248 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ATXN1LP0C7T5 689 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NDUFB7P17568 137 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 GALP22466 123 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ITGA3P26006 1051 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 G0S2P27469 103 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CERS1P27544 350 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 HTR2AP28223 471 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 HTR1EP28566 365 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 DDTP30046 118 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 APOBEC3AP31941 199 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SFNP31947 248 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 S100A11P31949 105 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 GKP32189 559 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 WNT5AP41221 380 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ELK3P41970 407 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TECP42680 631 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDKN2CP42773 168 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PTGFRP43088 359 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 HTR5AP47898 357 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RFX5P48382 616 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 MARCKSL1P49006 195 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 IDH3GP51553 393 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CLCN3P51790 818 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRKXP51817 358 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 GTF2A2P52657 109 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NAGLUP54802 743 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CASP6P55212 293 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAP1BP61224 184 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RPS7P62081 194 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SNRPEP62304 92 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SNRPFP62306 86 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 VAMP2P63027 116 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PPP3R1P63098 170 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 DCDP81605 110 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ARF5P84085 180 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL5RAQ01344 420 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 YWHAHQ04917 246 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CD47Q08722 323 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ACSM1Q08AH1 577 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NAE1Q13564 534 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 BAATQ14032 418 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 FASTKQ14296 549 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 GRB14Q14449 540 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PGM5Q15124 567 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 USF2Q15853 346 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 MEP1AQ16819 746 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 IMPG1Q17R60 797 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 MPEG1Q2M385 716 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ALG11Q2TAA5 492 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM119Q4V9L6 283 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM35AQ53FP2 167 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 KLHL22Q53GT1 634 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PYDC2Q56P42 97 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 XKR4Q5GH76 650 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TFDP3Q5H9I0 405 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 UBXN11Q5T124 520 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAB12Q6IQ22 244 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 C8orf82Q6P1X6 216 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 BAIAP2L2Q6UXY1 529 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDHR3Q6ZTQ4 885 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 USP30Q70CQ3 517 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC26A9Q7LBE3 791 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CHMP1BQ7LBR1 199 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF367Q7RTV3 350 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SZRD1Q7Z422 152 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TRMT11Q7Z4G4 463 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 KDELC2Q7Z4H8 507 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PTAR1Q7Z6K3 402 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 B3GNT8Q7Z7M8 397 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TSPAN33Q86UF1 283 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NAA40Q86UY6 237 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 MON1AQ86VX9 555 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RFX6Q8HWS3 928 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NIM1KQ8IY84 436 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CFAP206Q8IYR0 622 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RNF148Q8N7C7 305 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SEMA6DQ8NFY4 1073 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms