RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 KCNJ5P48544 419 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 KCNC1P48547 511 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 EEF1A1P68104 462 aaKnown RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 IGLV3-21P80748 117 aaPredicted RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 SRSF2Q01130 221 aaKnown RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 TGM3Q08188 693 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 ZNF267Q14586 743 aaPredicted RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 TRIP13Q15645 432 aaPredicted RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 PPP1R3AQ16821 1122 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 EEF1A1P5Q5VTE0 462 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 ANKRD22Q5VYY1 191 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 ANKRD34AQ69YU3 496 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 TIGD3Q6B0B8 471 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 ZNF474Q6S9Z5 364 aaPredicted RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 SCIMPQ6UWF3 145 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 ENPP6Q6UWR7 440 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 ANGPTL8Q6UXH0 198 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 C22orf34Q6ZV56 151 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 KRT78Q8N1N4 520 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 OR1J4Q8NGS1 313 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 OR14L1PQ8NHC6 308 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 STARD4Q96DR4 205 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 RBM18Q96H35 190 aaKnown RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 KCNC2Q96PR1 638 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 UCN2Q96RP3 112 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 EGFL8Q99944 293 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 PRDM7Q9NQW5 492 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 PSD3Q9NYI0 1048 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 CDC42EP3Q9UKI2 254 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 ANK2Q01484 3957 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 MAGEB16A2A368 324 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 NPEPPSL1A6NEC2 478 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 C16orf97H3BN30 126 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 GOLGA8MH3BSY2 632 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 RTCAO00442 366 aaKnown RBP9.51□□□□□ -0.89
CLDND1-231ENST00000515620 PLOD2O00469 737 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 HS3ST1O14792 307 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 TGM6O95932 706 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 PLAUP00749 431 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 CHMP24386 653 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 ATP5A1P25705 553 aaKnown RBP9.51□□□□□ -0.89
CLDND1-231ENST00000515620 ACVR1BP36896 505 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 GDF5P43026 501 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 KCNJ1P48048 391 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 PCYT1AP49585 367 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 TMED10P49755 219 aaKnown RBP9.51□□□□□ -0.89
CLDND1-231ENST00000515620 SLC37A1P57057 533 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 SIRPAP78324 504 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 OCRLQ01968 901 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 RUNX1T1Q06455 604 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 ETFDHQ16134 617 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 CCNG2Q16589 344 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 C18orf21Q32NC0 220 aaPredicted RBP9.51□□□□□ -0.89
CLDND1-231ENST00000515620 P4HA3Q7Z4N8 544 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 UBE3DQ7Z6J8 389 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 TRIM42Q8IWZ5 723 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 PRR22Q8IZ63 422 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 ZNF611Q8N823 705 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 ACOT4Q8N9L9 421 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 C2CD4AQ8NCU7 369 aaPredicted RBP9.51□□□□□ -0.89
CLDND1-231ENST00000515620 BBOF1Q8ND07 529 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 RDH11Q8TC12 318 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 PGM2Q96G03 612 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 TMEM41AQ96HV5 264 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 KRT12Q99456 494 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 SLC39A3Q9BRY0 314 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 ROGDIQ9GZN7 287 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 METTL7AQ9H8H3 244 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 SERHLQ9NQF3 203 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 SNX15Q9NRS6 342 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 ELOVL5Q9NYP7 299 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 FETUBQ9UGM5 382 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 LAMP3Q9UQV4 416 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 CAPN6Q9Y6Q1 641 aa9.51□□□□□ -0.89
CLDND1-231ENST00000515620 HEATR5AQ86XA9 2040 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 C2orf92A0A1B0GVN3 265 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 LRRC14BA6NHZ5 514 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 OR6C76A6NM76 312 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 OR10H2O60403 315 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 SH3BGRLO75368 114 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 PRKRAO75569 313 aaKnown RBP9.5□□□□□ -0.89
CLDND1-231ENST00000515620 CLPSP04118 112 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 CCDC175P0C221 793 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 ALOX15P16050 662 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-231ENST00000515620 GABRB3P28472 473 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 STARP49675 285 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 RPS4XP62701 263 aaKnown RBP9.5□□□□□ -0.89
CLDND1-231ENST00000515620 RPP38P78345 283 aaKnown RBP9.5□□□□□ -0.89
CLDND1-231ENST00000515620 PCDH1Q08174 1060 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 SETDB1Q15047 1291 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 SPRED3Q2MJR0 410 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 BEX5Q5H9J7 111 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 C6orf52Q5T4I8 152 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 DRICH1Q6PGQ1 229 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-231ENST00000515620 RAD9BQ6WBX8 426 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 IFNEQ86WN2 208 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 AGGF1Q8N302 714 aaeCLIP9.5□□□□□ -0.89
CLDND1-231ENST00000515620 C7orf57Q8NEG2 295 aa9.5□□□□□ -0.89
CLDND1-231ENST00000515620 CAVIN3Q969G5 261 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms