RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CD1EP15812 388 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 TNNI3P19429 210 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 EEF1A2Q05639 463 aaKnown RBP19.59■□□□□ 0.73
LSM6-207ENST00000515311 MGAT2Q10469 447 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 HSPB3Q12988 150 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 PCOLCEQ15113 449 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 TLR1Q15399 786 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 LTB4RQ15722 352 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 MAPKAPK3Q16644 382 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 VPS26BQ4G0F5 336 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 ZNF628Q5EBL2 1059 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 PAPD4Q6PIY7 484 aaKnown RBP19.59■□□□□ 0.73
LSM6-207ENST00000515311 DGAT2L6Q6ZPD8 337 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 NDUFAF7Q7L592 441 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 TREML1Q86YW5 311 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 CLECL1Q8IZS7 167 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 FITM2Q8N6M3 262 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 MORN4Q8NDC4 146 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 CTHRC1Q96CG8 243 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 FBXL20Q96IG2 436 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 ITCHQ96J02 903 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 TUBB6Q9BUF5 446 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 SERHLQ9NQF3 203 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 P4HTMQ9NXG6 502 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 TAS2R9Q9NYW1 312 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 MAT2BQ9NZL9 334 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 PCDHGB4Q9UN71 923 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 PPIEQ9UNP9 301 aaKnown RBP19.59■□□□□ 0.73
LSM6-207ENST00000515311 IGHV3-20A0A0C4DH32 117 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 BBIP1A8MTZ0 92 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 PLOD2O00469 737 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 ANGPT2O15123 496 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 SEC24DO94855 1032 aaPredicted RBP19.58■□□□□ 0.72
LSM6-207ENST00000515311 C6orf47O95873 294 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 HPP00738 406 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 EFNA1P20827 205 aaPredicted RBP19.58■□□□□ 0.72
LSM6-207ENST00000515311 PRDX6P30041 224 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 HBA1P69905 142 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 CYLC2Q14093 348 aaPredicted RBP19.58■□□□□ 0.72
LSM6-207ENST00000515311 COQ5Q5HYK3 327 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 ANKRD46Q86W74 232 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 SNX32Q86XE0 403 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 PROSER1Q86XN7 944 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 VWA5B2Q8N398 1253 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 ADCY4Q8NFM4 1077 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 GOT1L1Q8NHS2 421 aaPredicted RBP19.58■□□□□ 0.72
LSM6-207ENST00000515311 RP9Q8TA86 221 aaKnown RBP19.58■□□□□ 0.72
LSM6-207ENST00000515311 THAP4Q8WY91 577 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 CMTM5Q96DZ9 223 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 ART5Q96L15 291 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 PTGFRNQ9P2B2 879 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 ZNF639Q9UID6 485 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 LEF1Q9UJU2 399 aaPredicted RBP19.58■□□□□ 0.72
LSM6-207ENST00000515311 FBXL4Q9UKA2 621 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 MAN2B2Q9Y2E5 1009 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 NDUFAF1Q9Y375 327 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 PCSK5Q92824 1860 aa19.58■□□□□ 0.72
LSM6-207ENST00000515311 A0A087WV62 115 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 NSG1A0A0A6YYJ2 146 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 A8MUA0 341 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 PLOD3O60568 738 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 DDAH2O95865 285 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 GPC1P35052 558 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 STX5Q13190 355 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 EXT1Q16394 746 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 BROXQ5VW32 411 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 ZSCAN1Q8NBB4 408 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 NFAM1Q8NET5 270 aaPredicted RBP19.57■□□□□ 0.72
LSM6-207ENST00000515311 B3GNT7Q8NFL0 401 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 OR4A15Q8NGL6 344 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 ZCCHC14Q8WYQ9 949 aaKnown RBP19.57■□□□□ 0.72
LSM6-207ENST00000515311 GTF2H4Q92759 462 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 ELP4Q96EB1 424 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 IMMP1LQ96LU5 166 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 PANX1Q96RD7 426 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 SIRT3Q9NTG7 399 aaPredicted RBP19.57■□□□□ 0.72
LSM6-207ENST00000515311 RAXQ9Y2V3 346 aa19.57■□□□□ 0.72
LSM6-207ENST00000515311 CDC14CA4D256 554 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 RFXANKO14593 260 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 NKX2-8O15522 239 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 EFSO43281 561 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 IGKV3-11P04433 115 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 CT62P0C5K7 136 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 COX4I1P13073 169 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 PTGER1P34995 402 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 SOX18P35713 384 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 TRPC1P48995 793 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 CDK9P50750 372 aaKnown RBP19.56■□□□□ 0.72
LSM6-207ENST00000515311 PGDP52209 483 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 SLC26A5P58743 744 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 TLE3Q04726 772 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 FUT7Q11130 342 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 CDC20Q12834 499 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 ATP1A4Q13733 1029 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 ZNF267Q14586 743 aaPredicted RBP19.56■□□□□ 0.72
LSM6-207ENST00000515311 KRT72Q14CN4 511 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 FHL5Q5TD97 284 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 PLAG1Q6DJT9 500 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 SLC2A7Q6PXP3 512 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 TMEM107Q6UX40 140 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms