RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZNF382Q96SR6 550 aa9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF703Q9H7S9 590 aaPredicted RBP9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 TMEM216Q9P0N5 145 aa9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 PSMC3IPQ9P2W1 217 aaPredicted RBP9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 CES1P1Q9UKY3 287 aa9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 SLC12A4Q9UP95 1085 aa9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 MYO9AB2RTY4 2548 aa9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 NOTCH2Q04721 2471 aa9.64□□□□□ -0.87
HMGXB3-205ENST00000514469 SVILO95425 2214 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 AKAP9Q99996 3911 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 PDZD2O15018 2839 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 C1orf226A1L170 272 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 OR14I1A6ND48 311 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 LRRC3CA6NJW4 275 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 AQP7O14520 342 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 DLX3O60479 287 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 OR4F21O95013 312 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 GSTA1P08263 222 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 CELA3AP09093 270 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 RHOXF2BP0C7M4 288 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 HSD3B1P14060 373 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 CPMP14384 443 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 COX6B1P14854 86 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 ATP5F1P24539 256 aaPredicted RBP9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 HSD3B2P26439 372 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 SERPINB3P29508 390 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 MAPK12P53778 367 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 CLCQ05315 142 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 CSTF3Q12996 717 aaKnown RBP9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 SLC29A2Q14542 456 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 RASA2Q15283 850 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 UNC50Q53HI1 259 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 SGO1Q5FBB7 561 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 TCHHL1Q5QJ38 904 aaPredicted RBP9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 PRAMEF20Q5VT98 475 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 SLC22A10Q63ZE4 541 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 TRILQ7L0X0 811 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 GSPT2Q8IYD1 628 aaKnown RBP9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 TAGAPQ8N103 731 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 CNPY4Q8N129 248 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 RPRMLQ8N4K4 120 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF615Q8N8J6 731 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 ACBD4Q8NC06 268 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 C17orf47Q8NEP4 570 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 OR10G3Q8NGC4 313 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 ACMSDQ8TDX5 336 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 TP53INP1Q96A56 240 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 SDCCAG3Q96C92 435 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 SMC6Q96SB8 1091 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 RHOXF2Q9BQY4 288 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 TRIM8Q9BZR9 551 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 OR10A5Q9H207 317 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 RUBCNLQ9H714 662 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 PROK2Q9HC23 129 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 CNIH4Q9P003 139 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 CNOT11Q9UKZ1 510 aaKnown RBP9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 PCDHA9Q9Y5H5 950 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 TACC2O95359 2948 aa9.63□□□□□ -0.87
HMGXB3-205ENST00000514469 C2orf92A0A1B0GVN3 265 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 GOLGA6L10A6NI86 522 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 NPIPA2E9PIF3 369 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 NPIPA3F8WFD2 350 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 MANBAO00462 879 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 BCKDKO14874 412 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 SUSD5O60279 629 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 GUCY1B2O75343 617 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 SUPT7LO94864 414 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 ATP1B1P05026 303 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 PORP16435 677 aaPredicted RBP9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 IMPDH1P20839 514 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 S1PR1P21453 382 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 KIR3DL1P43629 444 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 XKP51811 444 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 PRKAA2P54646 552 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 TRA2BP62995 288 aaKnown RBP9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 KCNJ2P63252 427 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 RPS6KA2Q15349 733 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 TEX35Q5T0J7 233 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 C6orf163Q5TEZ5 329 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 TMEM211Q6ICI0 200 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 GDF7Q7Z4P5 450 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 SLC22A9Q8IVM8 553 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 MMP21Q8N119 569 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 LRRC25Q8N386 305 aaPredicted RBP9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 VWA5B2Q8N398 1253 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 C1orf52Q8N6N3 182 aaKnown RBP9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 CDYL2Q8N8U2 506 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 LRRN4CLQ8ND94 238 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 FAM13CQ8NE31 585 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 OR7G1Q8NGA0 311 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 CA5BP1Q8WTZ4 195 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 ASB5Q8WWX0 329 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 ADIPOR1Q96A54 375 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 TM4SF18Q96CE8 201 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 L3HYPDHQ96EM0 354 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 HBEGFQ99075 208 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 TREX2Q9BQ50 279 aaPredicted RBP9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 ZFP64Q9NPA5 681 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 PNPLA3Q9NST1 481 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms