RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 EFTUD2Q15029 972 aaKnown RBP eCLIP9.48□□□□□ -0.89
PFDN1-205ENST00000512925 SF3B4Q15427 424 aaKnown RBP eCLIP9.48□□□□□ -0.89
PFDN1-205ENST00000512925 PPP1R3AQ16821 1122 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 ADNP2Q6IQ32 1131 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 HMBOX1Q6NT76 420 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 SBSNQ6UWP8 590 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 SLCO4C1Q6ZQN7 724 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 CEP112Q8N8E3 955 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 MNS1Q8NEH6 495 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 OR2L5Q8NG80 312 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 SLC22A8Q8TCC7 542 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 SLC44A1Q8WWI5 657 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 NTNG2Q96CW9 530 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 VPS39Q96JC1 886 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 CCL19Q99731 98 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 DOHHQ9BU89 302 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 TRIM54Q9BYV2 358 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 REXO4Q9GZR2 422 aaKnown RBP9.48□□□□□ -0.89
PFDN1-205ENST00000512925 RHOJQ9H4E5 214 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 MOCS1Q9NZB8 636 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 GRHL1Q9NZI5 618 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 SLC17A6Q9P2U8 582 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 VWA7Q9Y334 891 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 KCNE2Q9Y6J6 123 aa9.48□□□□□ -0.89
PFDN1-205ENST00000512925 FAM95CA0A1B0GW59 222 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 A8MXE2 369 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 ERN1O75460 977 aaKnown RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 CLEC3AO75596 197 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 TRAPPC6AO75865 159 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 RCBTB2O95199 551 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 AVPP01185 164 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 ENO2P09104 434 aaPredicted RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 CTAGE8P0CG41 777 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 C1GALT1C1LP0DN25 315 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 PAX1P15863 534 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 FPR1P21462 350 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 LOXP28300 417 aaPredicted RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 SERPINB3P29508 390 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 PTH2RP49190 550 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 NAGLUP54802 743 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 PLTPP55058 493 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 IGLV3-21P80748 117 aaPredicted RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 NTRK2Q16620 822 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 EIPR1Q53HC9 387 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 BICRALQ6AI39 1079 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 PLXDC2Q6UX71 529 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 TMIGD1Q6UXZ0 262 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 ZNF793Q6ZN11 406 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 CYS1Q717R9 158 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 UBE3DQ7Z6J8 389 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 ADGRE4PQ86SQ3 457 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 ZC3HC1Q86WB0 502 aaKnown RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 CTAGE4Q8IX94 777 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 DND1Q8IYX4 353 aaKnown RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 NKAPQ8N5F7 415 aaKnown RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 FAM13CQ8NE31 585 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 ZPLD1Q8TCW7 415 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 PPWD1Q96BP3 646 aaKnown RBP9.47□□□□□ -0.89
PFDN1-205ENST00000512925 WFIKKN1Q96NZ8 548 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 GNRHR2Q96P88 292 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 MAPKAP1Q9BPZ7 522 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 SFXN3Q9BWM7 321 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 POPDC3Q9HBV1 291 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 COPS7AQ9UBW8 275 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 NDRG3Q9UGV2 375 aa9.47□□□□□ -0.89
PFDN1-205ENST00000512925 CHD3Q12873 2000 aaKnown RBP9.46□□□□□ -0.89
PFDN1-205ENST00000512925 NINQ8N4C6 2090 aa9.46□□□□□ -0.89
PFDN1-205ENST00000512925 FREM3P0C091 2139 aa9.46□□□□□ -0.89
PFDN1-205ENST00000512925 A0A088AWK7 358 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 FGF17O60258 216 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 PRAMEF4O60810 478 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 SOX30O94993 753 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 NID1P14543 1247 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 ZNF37AP17032 561 aaPredicted RBP9.46□□□□□ -0.9
PFDN1-205ENST00000512925 ZNF10P21506 573 aaPredicted RBP9.46□□□□□ -0.9
PFDN1-205ENST00000512925 STX2P32856 288 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 GP5P40197 560 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 MC3RP41968 323 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 GDF5P43026 501 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 STT3AP46977 705 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 SLC12A2P55011 1212 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 FAM27E3Q08E93 113 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 NAB1Q13506 487 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 RCN2Q14257 317 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 SLBPQ14493 270 aaKnown RBP eCLIP9.46□□□□□ -0.9
PFDN1-205ENST00000512925 C18orf21Q32NC0 220 aaPredicted RBP9.46□□□□□ -0.9
PFDN1-205ENST00000512925 WIPI1Q5MNZ9 446 aaPredicted RBP9.46□□□□□ -0.9
PFDN1-205ENST00000512925 TBCELQ5QJ74 424 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 PRAMEF9Q5VWM5 478 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 HEPHL1Q6MZM0 1159 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 TRIM40Q6P9F5 258 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 CCDC25Q86WR0 208 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 OR4N5Q8IXE1 308 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 MMGT1Q8N4V1 131 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 TTLQ8NG68 377 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 FBXO25Q8TCJ0 367 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 DOK4Q8TEW6 326 aa9.46□□□□□ -0.9
PFDN1-205ENST00000512925 CCT6BQ92526 530 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms