RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TECRLQ5HYJ1 363 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 CCNYL2Q5T2Q4 361 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 C1orf185Q5T7R7 199 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 CES4AQ5XG92 561 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 RTL6Q6ICC9 239 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 OR52E8Q6IFG1 317 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 TMEM64Q6YI46 380 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 MILR1Q7Z6M3 343 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 OR4K14Q8NGD5 310 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 OR52B6Q8NGF0 335 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 IFT81Q8WYA0 676 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 DIO2Q92813 273 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 ACSS3Q9H6R3 686 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 B4GALT7Q9UBV7 327 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 TMCO1Q9UM00 188 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 FAM215AQ9Y5M1 114 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 CACNA1CQ13936 2221 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 CSMD2Q7Z408 3487 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 ZNF407Q9C0G0 2248 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 A0A0G2JNJ9 132 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 FAM47E-STBD1D6RA91 191 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 TRAPPC6AO75865 159 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 ACSL3O95573 720 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 IGFBP2P18065 325 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 NT5EP21589 574 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 GDF1P27539 372 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 SSTR4P31391 388 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 XKP51811 444 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 MYBPHQ13203 477 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 NTRK2Q16620 822 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 FRG2Q64ET8 278 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 ADGRD1Q6QNK2 874 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 PAGE2Q7Z2X7 111 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 TMEM200AQ86VY9 491 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 GALNT12Q8IXK2 581 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 FRG2BQ96QU4 278 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 SLC6A15Q9H2J7 730 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 CXorf21Q9HAI6 301 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 PROK2Q9HC23 129 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 SLC24A3Q9HC58 644 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 RYDENQ9NUL5 291 aaKnown RBP14.15□□□□□ -0.14
TPM3-219ENST00000509409 SPRR3Q9UBC9 169 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 Q9UFV3 132 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 CNOT11Q9UKZ1 510 aaKnown RBP14.15□□□□□ -0.14
TPM3-219ENST00000509409 CHCHD2Q9Y6H1 151 aaPredicted RBP14.15□□□□□ -0.14
TPM3-219ENST00000509409 TACC2O95359 2948 aa14.15□□□□□ -0.14
TPM3-219ENST00000509409 C15orf38-AP3S2A0A0A6YYH1 394 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 POC1B-GALNT4F8VUJ3 575 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 SEMA3DO95025 777 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 KRT15P19012 456 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
TPM3-219ENST00000509409 SERPINB9P50453 376 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 NRG3P56975 720 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 FBXW4P57775 412 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 TSNAXIP1Q2TAA8 658 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 TBCELQ5QJ74 424 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 UBAP2Q5T6F2 1119 aaKnown RBP14.14□□□□□ -0.15
TPM3-219ENST00000509409 WDR53Q7Z5U6 358 aaPredicted RBP14.14□□□□□ -0.15
TPM3-219ENST00000509409 MYRIPQ8NFW9 859 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 NEIL3Q8TAT5 605 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 SLC44A1Q8WWI5 657 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 TP53INP1Q96A56 240 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 ZNF597Q96LX8 424 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 NSUN5Q96P11 429 aaKnown RBP14.14□□□□□ -0.15
TPM3-219ENST00000509409 NTMT1Q9BV86 223 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 TSPYL1Q9H0U9 437 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 OR10A5Q9H207 317 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 ELOVL6Q9H5J4 265 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 ZNF703Q9H7S9 590 aaPredicted RBP14.14□□□□□ -0.15
TPM3-219ENST00000509409 ACKR4Q9NPB9 350 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 TEX10Q9NXF1 929 aaPredicted RBP14.14□□□□□ -0.15
TPM3-219ENST00000509409 QPCTLQ9NXS2 382 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 XPR1Q9UBH6 696 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 KCNN3Q9UGI6 736 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 NPFFR2Q9Y5X5 522 aa14.14□□□□□ -0.15
TPM3-219ENST00000509409 DNAJC13O75165 2243 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 A0A1W2PS29 197 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 LRRC3CA6NJW4 275 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 STX16-NPEPL1H3BU86 382 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 STX16O14662 325 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 GUCY1B2O75343 617 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 KRT38O76015 456 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 ZWINTO95229 277 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 CLPSP04118 112 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 CT62P0C5K7 136 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 PORP16435 677 aaPredicted RBP14.13□□□□□ -0.15
TPM3-219ENST00000509409 ENDOUP21128 410 aaKnown RBP14.13□□□□□ -0.15
TPM3-219ENST00000509409 ADH7P40394 386 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 MASP1P48740 699 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 RPP38P78345 283 aaKnown RBP14.13□□□□□ -0.15
TPM3-219ENST00000509409 TOMM20Q15388 145 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 TEX35Q5T0J7 233 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 RIPPLY2Q5TAB7 128 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 PACS2Q86VP3 889 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 LIX1LQ8IVB5 337 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 LRRC25Q8N386 305 aaPredicted RBP14.13□□□□□ -0.15
TPM3-219ENST00000509409 UHMK1Q8TAS1 419 aaKnown RBP14.13□□□□□ -0.15
TPM3-219ENST00000509409 PAFAH2Q99487 392 aa14.13□□□□□ -0.15
TPM3-219ENST00000509409 MRPL1Q9BYD6 325 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms