RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ARFIP1P53367 373 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 CASP6P55212 293 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 MLF1P58340 268 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 NAA20P61599 178 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 RPL38P63173 70 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 PMP22Q01453 160 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 GUCY1A3Q02108 690 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 ALDH6A1Q02252 535 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 FOLH1Q04609 750 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 RBPJQ06330 500 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 DUSP8Q13202 625 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 SERTAD2Q14140 314 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 TERF2Q15554 542 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 ELAVL1Q15717 326 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 C6orf136Q5SQH8 315 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 FAM71E1Q6IPT2 247 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 ANKRD26P1Q6NSI1 321 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 NOXRED1Q6NXP6 359 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 LARP4Q71RC2 724 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 GALNTL5Q7Z4T8 443 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 GPR180Q86V85 440 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 NUDT13Q86X67 352 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 C7orf57Q8NEG2 295 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 CLHC1Q8NHS4 586 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF681Q96N22 645 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 OR52B2Q96RD2 323 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 SLX1AQ9BQ83 275 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 EBF4Q9BQW3 602 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 C1orf50Q9BV19 199 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 HES7Q9BYE0 225 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 NUF2Q9BZD4 464 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 OR8D2Q9GZM6 311 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 WDR55Q9H6Y2 383 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 AKTIPQ9H8T0 292 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 WDR41Q9HAD4 459 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 MEAF6Q9HAF1 191 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 THAP1Q9NVV9 213 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 MS4A12Q9NXJ0 267 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 NKIRAS1Q9NYS0 192 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 PLEKHB1Q9UF11 243 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 BAIAP2L1Q9UHR4 511 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 PHF11Q9UIL8 331 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 MCM8Q9UJA3 840 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 ERVK-11Q9UQG0 969 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 STK38LQ9Y2H1 464 aa8.13□□□□□ -1.11
PDLIM5-213ENST00000509357 PTPN13Q12923 2485 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 A0A1B0GUH1 482 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 TMEM200CA6NKL6 621 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 NPIPA5E9PKD4 350 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ANKRD28O15084 1053 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ATP8B1O43520 1251 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 OR10H2O60403 315 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF354AO60765 605 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 PEX11AO75192 247 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ITGA10O75578 1167 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 C1QCP02747 245 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 BUD31P41223 144 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ZFP36L2P47974 494 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 RPL14P50914 215 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 SSR4P51571 173 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 DIO3P55073 304 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 MGAT2Q10469 447 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ASPHQ12797 758 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 GALNTL6Q49A17 601 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 CCNYL2Q5T2Q4 361 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 C10orf62Q5T681 223 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 NDUFAF5Q5TEU4 345 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF468Q5VIY5 522 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 C1QL3Q5VWW1 255 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 TMEM198Q66K66 360 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 HSDL2Q6YN16 418 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 RGS9BPQ6ZS82 235 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 FAM47EQ6ZV65 393 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 FJX1Q86VR8 437 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 DDIASQ8IXT1 998 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 CYP4Z2PQ8N1L4 340 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 GBP7Q8N8V2 638 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 APCDD1LQ8NCL9 501 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 MORN4Q8NDC4 146 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 MDS2Q8NDY4 140 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 OR14A16Q8NHC5 309 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 RFWD2Q8NHY2 731 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 RAB3IL1Q8TBN0 382 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 PTPMT1Q8WUK0 201 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 PPWD1Q96BP3 646 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 CNRIP1Q96F85 164 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 THOC1Q96FV9 657 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 RBM18Q96H35 190 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 MAELQ96JY0 434 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 TEX37Q96LM6 180 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 DGAT2Q96PD7 388 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 TSPAN10Q9H1Z9 355 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 RPF2Q9H7B2 306 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ANKRA2Q9H9E1 313 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 LRTM1Q9HBL6 345 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 INTS9Q9NV88 658 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 C1orf109Q9NX04 203 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms