RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CNIH3Q8TBE1 160 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 STT3BQ8TCJ2 826 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SLC38A5Q8WUX1 472 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 BORCS6Q96GS4 357 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SLITRK1Q96PX8 696 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR5B2Q96R09 309 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 VPS25Q9BRG1 176 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NAT9Q9BTE0 207 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 RNPEPQ9H4A4 650 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 KLHL13Q9P2N7 655 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TRMT6Q9UJA5 497 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SORCS3Q9UPU3 1222 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 A0A0A6YYK5 440 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 A0A1B0GV72 72 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TCRBV21S2A2A0A5A6 115 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ANKRD61A6NGH8 418 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SEC14L6B5MCN3 397 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 K7ESF4 209 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 M0R036 132 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SPINT1O43278 529 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ATP8B1O43520 1251 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ITM2AO43736 263 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 DGAT1O75907 488 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TJP3O95049 919 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TUBBP07437 444 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ARP10275 920 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PGAM1P18669 254 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ARRB2P32121 409 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CXCR3P49682 368 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ATP1B3P54709 279 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 RHOAP61586 193 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NKX6-1P78426 367 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SLC3A1Q07837 685 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TWF1Q12792 350 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZNHIT3Q15649 155 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF124Q15973 351 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NDUFA5Q16718 116 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF544Q6NX49 715 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PRMT9Q6P2P2 845 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 LRRC8BQ6P9F7 803 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ASRGL1Q7L266 308 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF720Q7Z2F6 126 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ECHDC2Q86YB7 292 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ARFGAP1Q8N6T3 406 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PCDH20Q8N6Y1 951 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ANKLE1Q8NAG6 615 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR13C5Q8NGS8 318 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 RPLP0P6Q8NHW5 317 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF671Q8TAW3 534 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SNAPC3Q92966 411 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ESAMQ96AP7 390 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 EBNA1BP2Q99848 306 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NTPCRQ9BSD7 190 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 GLIS2Q9BZE0 524 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SIRPDQ9H106 197 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 DHX35Q9H5Z1 703 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 MRPL44Q9H9J2 332 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 STMN3Q9NZ72 180 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SEC14L4Q9UDX3 406 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SDR42E2A6NKP2 422 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ST8SIA5O15466 376 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 KCNJ13O60928 360 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 IFNA21P01568 189 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 FGBP02675 491 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 AMY2AP04746 511 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PLEKP08567 350 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ANXA3P12429 323 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 AMY2BP19961 511 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 HOXD9P28356 352 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 RPL9P32969 192 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 LIPAP38571 399 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PTPN9P43378 593 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SNAP25P60880 206 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 HERVK_113P63132 956 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SHC2P98077 582 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PMP22Q01453 160 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CTBSQ01459 385 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 EXOSC2Q13868 293 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 FGFBP1Q14512 234 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 RBM48Q5RL73 367 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR2A2Q6IF42 318 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PLEKHA7Q6IQ23 1121 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF572Q7Z3I7 529 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 AMZ2Q86W34 360 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 REXO1L1PQ8IX06 675 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TTLQ8NG68 377 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR8G5Q8NG78 346 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR56A1Q8NGH5 318 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR2I1PQ8NGU4 316 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TNFAIP8L1Q8WVP5 186 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 FAF2Q96CS3 445 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 HHIPL1Q96JK4 782 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ERVK-6Q9BXR3 956 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PARD6BQ9BYG5 372 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 GBA3Q9H227 469 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SEMA6AQ9H2E6 1030 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZDHHC6Q9H6R6 413 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NRBP2Q9NSY0 501 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PLEK2Q9NYT0 353 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ZFR2Q9UPR6 939 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms