RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 TRIM3O75382 744 aaPredicted RBP16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 CTAG2O75638 210 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 KLHL2O95198 593 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 CLPSP04118 112 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 PIK3CGP48736 1102 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 NEK2P51955 445 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 IRF9Q00978 393 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 MROH9Q5TGP6 573 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 ZDHHC24Q6UX98 284 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 NUDT13Q86X67 352 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 ZNF441Q8N8Z8 693 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 DIO2Q92813 273 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 SLC6A15Q9H2J7 730 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 CXorf21Q9HAI6 301 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 DNAJB12Q9NXW2 375 aaKnown RBP16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 RNF11Q9Y3C5 154 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 IKBKGQ9Y6K9 419 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 EML6Q6ZMW3 1958 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 A0A096LPK6 155 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 HMX2A2RU54 273 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 LRRC14BA6NHZ5 514 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 SNX4O95219 450 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 CLDN9O95484 217 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 AIFM1O95831 613 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 EPPINO95925 133 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 KIR2DL3P43628 341 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 IST1P53990 364 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 DUSP8Q13202 625 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 OR52E8Q6IFG1 317 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 KLC3Q6P597 504 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 SEM1Q6ZVN7 128 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 GOLGA7Q7Z5G4 137 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 NRGNQ92686 78 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 UCN3Q969E3 161 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 GPR78Q96P69 363 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 SECISBP2Q96T21 854 aaKnown RBP16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 SERPINI1Q99574 410 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 SNX15Q9NRS6 342 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 NPFFR2Q9Y5X5 522 aa16.73■□□□□ 0.27
ATPAF2-209ENST00000497871 PGRMC2O15173 223 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 GDF1P27539 372 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 PIK3R1P27986 724 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 TYK2P29597 1187 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 SSTR4P31391 388 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 TRPC1P48995 793 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 FUT7Q11130 342 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 RPS6KA2Q15349 733 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 HLA-DQA1Q5Y7H0 255 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 ZZZ3Q8IYH5 903 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 NINJ1Q92982 152 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 MRRFQ96E11 262 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 ZNF597Q96LX8 424 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 TIMP4Q99727 224 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 ANGPTL4Q9BY76 406 aa16.72■□□□□ 0.27
ATPAF2-209ENST00000497871 C15orf38-AP3S2A0A0A6YYH1 394 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 FAM221AA4D161 298 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 DVL2O14641 736 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 SEMA3DO95025 777 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 LRATO95237 230 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 SIX3O95343 332 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 GBAP04062 536 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 HPNP05981 417 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 CEACAM8P31997 349 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 TIMP3P35625 211 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 FBXW4P57775 412 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 SF3B4Q15427 424 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 TMEM64Q6YI46 380 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 PACS2Q86VP3 889 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 GALNT12Q8IXK2 581 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 ZNF615Q8N8J6 731 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 OR4K14Q8NGD5 310 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 SPPL2AQ8TCT8 520 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 ATP6V1E2Q96A05 226 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 ADIPOR1Q96A54 375 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 LRRC46Q96FV0 321 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 FOXC2Q99958 501 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 POLDIP3Q9BY77 421 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 OR10A5Q9H207 317 aa16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 NOL11Q9H8H0 719 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 CPSF2Q9P2I0 782 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 ZNF629Q9UEG4 869 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-209ENST00000497871 OR7A17O14581 309 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 TRAPPC6AO75865 159 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 ACSL3O95573 720 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 CASQ1P31415 396 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 UQCRC1P31930 480 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 TMED10P49755 219 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 CDK9P50750 372 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 XKP51811 444 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 NRG3P56975 720 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 RPP38P78345 283 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 CRYZQ08257 329 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 SNTB1Q13884 538 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 ACSF3Q4G176 576 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 C10orf62Q5T681 223 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 LACC1Q8IV20 430 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 PM20D2Q8IYS1 436 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 C17orf47Q8NEP4 570 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 TNIP2Q8NFZ5 429 aa16.7■□□□□ 0.26
ATPAF2-209ENST00000497871 OR7G1Q8NGA0 311 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms