RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SSTR4P31391 388 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 CDH13P55290 713 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 GALNT1Q10472 559 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-209ENST00000496445 IFT88Q13099 833 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 SGO1Q5FBB7 561 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 TCHHL1Q5QJ38 904 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-209ENST00000496445 C10orf62Q5T681 223 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-209ENST00000496445 TTC19Q6DKK2 380 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-209ENST00000496445 TRILQ7L0X0 811 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 SLC29A4Q7RTT9 530 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 GDF7Q7Z4P5 450 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 MMP21Q8N119 569 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 FBXW8Q8N3Y1 598 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 SMC6Q96SB8 1091 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 ELOVL6Q9H5J4 265 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF703Q9H7S9 590 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-209ENST00000496445 TNFRSF10DQ9UBN6 386 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 TRPS1Q9UHF7 1281 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 FREM3P0C091 2139 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 OR6C76A6NM76 312 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 RIPK2O43353 540 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 OTCP00480 354 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 RFPL3SP0C7P2 107 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
VTI1A-209ENST00000496445 PIK3R1P27986 724 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 FUT7Q11130 342 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 TBL3Q12788 808 aaKnown RBP13.14□□□□□ -0.31
VTI1A-209ENST00000496445 NTRK2Q16620 822 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 CCNYL2Q5T2Q4 361 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 PAOXQ6QHF9 649 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 TIFABQ6ZNK6 161 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 GALNT12Q8IXK2 581 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF615Q8N8J6 731 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 OR5M9Q8NGP3 310 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 SELENOMQ8WWX9 145 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 TMEM237Q96Q45 408 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 HBEGFQ99075 208 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 EPB41L4BQ9H329 900 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 RUBCNLQ9H714 662 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 TMEM216Q9P0N5 145 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 CES1P1Q9UKY3 287 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 CNOT11Q9UKZ1 510 aaKnown RBP13.14□□□□□ -0.31
VTI1A-209ENST00000496445 SLC12A4Q9UP95 1085 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 RNF6Q9Y252 685 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 FAM215AQ9Y5M1 114 aa13.14□□□□□ -0.31
VTI1A-209ENST00000496445 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.14□□□□□ -0.31
VTI1A-209ENST00000496445 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
VTI1A-209ENST00000496445 C2orf92A0A1B0GVN3 265 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 OR14I1A6ND48 311 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 ENO4A6NNW6 628 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 AQP7O14520 342 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 OR4F21O95013 312 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 CPMP14384 443 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 S1PR1P21453 382 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 SOX18P35713 384 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 HSD17B3P37058 310 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 MAPK12P53778 367 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 NUP107P57740 925 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 CLCQ05315 142 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 DUSP2Q05923 314 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 TFF3Q07654 80 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 GXYLT1Q4G148 440 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 UNC50Q53HI1 259 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF678Q5SXM1 525 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 SLC22A10Q63ZE4 541 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 TMEM211Q6ICI0 200 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 TMEM64Q6YI46 380 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 PAGE2Q7Z2X7 111 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 DND1Q8IYX4 353 aaKnown RBP13.13□□□□□ -0.31
VTI1A-209ENST00000496445 FAM13CQ8NE31 585 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 MYRIPQ8NFW9 859 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 OR4K14Q8NGD5 310 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 TRPC4APQ8TEL6 797 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 CA5BP1Q8WTZ4 195 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 MZB1Q8WU39 189 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 TREX2Q9BQ50 279 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-209ENST00000496445 TXLNGYQ9BZA5 131 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 ENKD1Q9H0I2 346 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 OR10A5Q9H207 317 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 BRF2Q9HAW0 419 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 AHSPQ9NZD4 102 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 COQ3Q9NZJ6 369 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 SPRR3Q9UBC9 169 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 DTX4Q9Y2E6 619 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 PCDHA9Q9Y5H5 950 aa13.13□□□□□ -0.31
VTI1A-209ENST00000496445 TEP1Q99973 2627 aaKnown RBP13.13□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF469Q96JG9 3925 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-209ENST00000496445 NKX2-6A6NCS4 301 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 KIF2AO00139 706 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-209ENST00000496445 BCKDKO14874 412 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 DLX3O60479 287 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 SERPINB3P29508 390 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 XKP51811 444 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 KCNJ2P63252 427 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 MGAT2Q10469 447 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms