RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TMPRSS11DO60235 418 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 GREM1O60565 184 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 GPR37L1O60883 481 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 NR2F6P10588 404 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 PCMT1P22061 227 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 PAICSP22234 425 aaKnown RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 MC3RP41968 323 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 ACTR1BP42025 376 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 LIM2P55344 173 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 ACTR1AP61163 376 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 ZNF311Q5JNZ3 666 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 ENPP7Q6UWV6 458 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 NANOGNBQ7Z5D8 188 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 OR9A2Q8NGT5 310 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 CHPT1Q8WUD6 406 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 LCN9Q8WX39 176 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 ZFP3Q96NJ6 502 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 TREX2Q9BQ50 279 aaPredicted RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 UCKL1Q9NWZ5 548 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 FBXL12Q9NXK8 326 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 QPCTLQ9NXS2 382 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 ZNF624Q9P2J8 865 aaPredicted RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 NDRG4Q9ULP0 352 aaKnown RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 CORO2BQ9UQ03 480 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 PTPRDP23468 1912 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 FAM170BA6NMN3 283 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 M0R082 166 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 GABARAPO95166 117 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 IL12RB1P42701 662 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 CCR8P51685 355 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 C1orf61Q13536 156 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 HENMT1Q5T8I9 393 aaKnown RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 LAPTM4BQ86VI4 370 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 METTL4Q8N3J2 472 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 SLC7A13Q8TCU3 470 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 APH1BQ8WW43 257 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 TRIM43Q96BQ3 446 aaPredicted RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 ZBED6CLQ96FA7 236 aaPredicted RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 WACQ9BTA9 647 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 MRPS30Q9NP92 439 aaKnown RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 BTNL2Q9UIR0 455 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 ENPP4Q9Y6X5 453 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 SCN2BO60939 215 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 MPC1LP0DKB6 136 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 IL1RNP18510 177 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 GRPRP30550 384 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 GDI1P31150 447 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 SDC2P34741 201 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 SLC3A1Q07837 685 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 CCDC92Q53HC0 331 aaPredicted RBP12.75□□□□□ -0.37
GPC1-209ENST00000495100 MLIPQ5VWP3 458 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ARL9Q6T311 187 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 LRRTM4Q86VH4 590 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 CALHM3Q86XJ0 350 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 GATSQ8NAP1 163 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 OR8J2Q8NGG1 315 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ZNF689Q96CS4 500 aaPredicted RBP12.75□□□□□ -0.37
GPC1-209ENST00000495100 PPP1R16AQ96I34 528 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 DUSP21Q9H596 190 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 KCNE1BA0A087WTH5 132 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 FAM171A2A8MVW0 826 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 CCRL2O00421 344 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 CDK1P06493 297 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 NT5EP21589 574 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 PPP5CP53041 499 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 SLC7A9P82251 487 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 MPEG1Q2M385 716 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 IDNKQ5T6J7 187 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 PIP5KL1Q5T9C9 394 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 PAMR1Q6UXH9 720 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 NUDT13Q86X67 352 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 SIMC1Q8NDZ2 872 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 OR6T1Q8NGN1 323 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 KLHL6Q8WZ60 621 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ECHDC3Q96DC8 303 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 RNFT2Q96EX2 444 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 C7orf34Q96L11 122 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ACER3Q9NUN7 267 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ZNF226Q9NYT6 803 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ZNF639Q9UID6 485 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 WDR37Q9Y2I8 494 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 KCNE3Q9Y6H6 103 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 UNC13CQ8NB66 2214 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ABHD14A-ACY1A0A1B0GW23 586 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 OR2A25A4D2G3 310 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 AQP9O43315 295 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 SLCO2B1O94956 709 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 POLR2CP19387 275 aaPredicted RBP12.75□□□□□ -0.37
GPC1-209ENST00000495100 CPN2P22792 545 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 KELP23276 732 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 STXBP1P61764 594 aaKnown RBP12.75□□□□□ -0.37
GPC1-209ENST00000495100 SLC9A5Q14940 896 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 TOR1AIP1Q5JTV8 583 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 ABI3BPQ7Z7G0 1075 aa12.75□□□□□ -0.37
GPC1-209ENST00000495100 IPCEF1Q8WWN9 437 aaPredicted RBP12.75□□□□□ -0.37
GPC1-209ENST00000495100 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms