RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TP53I11O14683 189 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 TRIM3O75382 744 aaPredicted RBP21.34■■□□□ 1.01
COL27A1-208ENST00000494780 AIFM1O95831 613 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 CLPSP04118 112 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 PEX19P40855 299 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 MROH9Q5TGP6 573 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 TMEM198Q66K66 360 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 OR52E8Q6IFG1 317 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 KLC3Q6P597 504 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 GOLGA7Q7Z5G4 137 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 ZNF597Q96LX8 424 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 SNX15Q9NRS6 342 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 HMX2A2RU54 273 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 LRRC14BA6NHZ5 514 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 KLHL2O95198 593 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 LRATO95237 230 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 TRPC1P48995 793 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 NEK2P51955 445 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 RPS6KA2Q15349 733 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 TRADDQ15628 312 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 DIO2Q92813 273 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 CXorf21Q9HAI6 301 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 DNAJB12Q9NXW2 375 aaKnown RBP21.33■■□□□ 1.01
COL27A1-208ENST00000494780 RNF11Q9Y3C5 154 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 IKBKGQ9Y6K9 419 aa21.33■■□□□ 1.01
COL27A1-208ENST00000494780 NCKAP5O14513 1909 aa21.33■■□□□ 1
COL27A1-208ENST00000494780 A0A096LPK6 155 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 AHRRA9YTQ3 701 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 SYT5O00445 386 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 CTAG2O75638 210 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 SEMA3DO95025 777 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 CLDN9O95484 217 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 GDF1P27539 372 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 SSTR4P31391 388 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 HLA-DQA1Q5Y7H0 255 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 SEM1Q6ZVN7 128 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 NRGNQ92686 78 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 NINJ1Q92982 152 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 UCN3Q969E3 161 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 GPR78Q96P69 363 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 SECISBP2Q96T21 854 aaKnown RBP21.32■■□□□ 1
COL27A1-208ENST00000494780 SERPINI1Q99574 410 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 CPSF2Q9P2I0 782 aaKnown RBP21.32■■□□□ 1
COL27A1-208ENST00000494780 ARHGAP21Q5T5U3 1957 aa21.32■■□□□ 1
COL27A1-208ENST00000494780 C15orf38-AP3S2A0A0A6YYH1 394 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 PGRMC2O15173 223 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 SNX4O95219 450 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 SIX3O95343 332 aaPredicted RBP21.31■■□□□ 1
COL27A1-208ENST00000494780 EPPINO95925 133 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 PIK3R1P27986 724 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 KIR2DL3P43628 341 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 TMED10P49755 219 aaKnown RBP21.31■■□□□ 1
COL27A1-208ENST00000494780 IST1P53990 364 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 FUT7Q11130 342 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 DUSP8Q13202 625 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 TMEM64Q6YI46 380 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 GALNT12Q8IXK2 581 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 SPPL2AQ8TCT8 520 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 MRRFQ96E11 262 aaKnown RBP21.31■■□□□ 1
COL27A1-208ENST00000494780 NPFFR2Q9Y5X5 522 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 NINQ8N4C6 2090 aa21.31■■□□□ 1
COL27A1-208ENST00000494780 DVL2O14641 736 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 GBAP04062 536 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 TYK2P29597 1187 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 CEACAM8P31997 349 aaPredicted RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 SERPINB8P50452 374 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 FBXW4P57775 412 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 RPP38P78345 283 aaKnown RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 CRYZQ08257 329 aaKnown RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 ACSF3Q4G176 576 aaPredicted RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 ZZZ3Q8IYH5 903 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 RELL2Q8NC24 303 aaPredicted RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 OR4K14Q8NGD5 310 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 ANP32BQ92688 251 aaKnown RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 ATP6V1E2Q96A05 226 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 LRRC46Q96FV0 321 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 RILPQ96NA2 401 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 ANGPTL4Q9BY76 406 aa21.3■■□□□ 1
COL27A1-208ENST00000494780 POLDIP3Q9BY77 421 aaKnown RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 NOL11Q9H8H0 719 aaKnown RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 TEX10Q9NXF1 929 aaPredicted RBP21.3■■□□□ 1
COL27A1-208ENST00000494780 A0A1W2PS29 197 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 ALDOAP04075 364 aaKnown RBP21.29■■□□□ 1
COL27A1-208ENST00000494780 HPNP05981 417 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 CASQ1P31415 396 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 UQCRC1P31930 480 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 ASCL1P50553 236 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 NRG3P56975 720 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 SF3B4Q15427 424 aaKnown RBP eCLIP21.29■■□□□ 15e-7■■■■□ 24.5
COL27A1-208ENST00000494780 TECRLQ5HYJ1 363 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 C10orf62Q5T681 223 aaPredicted RBP21.29■■□□□ 1
COL27A1-208ENST00000494780 PACS2Q86VP3 889 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 LACC1Q8IV20 430 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 PM20D2Q8IYS1 436 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 ZNF615Q8N8J6 731 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 C17orf47Q8NEP4 570 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 ADIPOR1Q96A54 375 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 TIMP4Q99727 224 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 FOXC2Q99958 501 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 OR10A5Q9H207 317 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms