RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ELAVL4P26378 380 aaKnown RBP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 ACVR2AP27037 513 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 CHRNB4P30926 498 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 PHBP35232 272 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 ARL1P40616 181 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 CCNG1P51959 295 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 ARFIP1P53367 373 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 GALNT1Q10472 559 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 PMPCAQ10713 525 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 WHAMMP3Q1A5X7 153 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 FRG2Q64ET8 278 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 FAM180BQ6P0A1 224 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF585AQ6P3V2 769 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 KLC3Q6P597 504 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 CYP20A1Q6UW02 462 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 RNF111Q6ZNA4 994 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 MED12LQ86YW9 2145 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 FBXW8Q8N3Y1 598 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF615Q8N8J6 731 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 FAM13CQ8NE31 585 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 OR4F6Q8NGB9 312 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 OR5M3Q8NGP4 307 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 SLC22A8Q8TCC7 542 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF483Q8TF39 744 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 RIT1Q92963 219 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 REPS1Q96D71 796 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 FRG2BQ96QU4 278 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 FMO2Q99518 471 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 CENPKQ9BS16 269 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 NTMT1Q9BV86 223 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 RUBCNLQ9H714 662 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 COQ3Q9NZJ6 369 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 TNPO3Q9Y5L0 923 aaKnown RBP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 MPDZO75970 2070 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 PCNX3Q9H6A9 2034 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 A0A0G2JNJ9 132 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 A8MT66 165 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 POC1B-GALNT4F8VUJ3 575 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 KLK1P06870 262 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 SLC35E2P0CK97 266 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 GLI4P10075 376 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 MSX1P28360 303 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 CDH13P55290 713 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 WNT3P56703 355 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 FBXW4P57775 412 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 KCNJ2P63252 427 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 PHEXP78562 749 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 TLE4Q04727 773 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 NTRK2Q16620 822 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 GGTA1PQ4G0N0 100 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 SGO1Q5FBB7 561 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 FNDC7Q5VTL7 733 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 SLC22A10Q63ZE4 541 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 DESI1Q6ICB0 168 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 OR52E8Q6IFG1 317 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 RGS9BPQ6ZS82 235 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 SLC29A4Q7RTT9 530 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 COMMD6Q7Z4G1 85 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 LIX1LQ8IVB5 337 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 PRR22Q8IZ63 422 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 EID3Q8N140 333 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 LRRC25Q8N386 305 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-208ENST00000494728 LILRB4Q8NHJ6 448 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 IFT81Q8WYA0 676 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 RND1Q92730 232 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 C14orf79Q96F83 325 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 ART5Q96L15 291 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 TTYH2Q9BSA4 534 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 PSD3Q9NYI0 1048 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 Q9UFV3 132 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 CES1P1Q9UKY3 287 aa10.7□□□□□ -0.7
VTI1A-208ENST00000494728 TRGV5A0A0B4J1U4 118 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 OR14I1A6ND48 311 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 TRIM3O75382 744 aaPredicted RBP10.69□□□□□ -0.7
VTI1A-208ENST00000494728 PDYNP01213 254 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 RBP1P09455 135 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 S1PR1P21453 382 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 SSTR2P30874 369 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 TLX1P31314 330 aaPredicted RBP10.69□□□□□ -0.7
VTI1A-208ENST00000494728 TRPC1P48995 793 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 MAN2A2P49641 1150 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 MGAT2Q10469 447 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 FUT7Q11130 342 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 TBL3Q12788 808 aaKnown RBP10.69□□□□□ -0.7
VTI1A-208ENST00000494728 NNATQ16517 81 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 METTL2BQ6P1Q9 378 aaKnown RBP10.69□□□□□ -0.7
VTI1A-208ENST00000494728 SEM1Q6ZVN7 128 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 GALNT12Q8IXK2 581 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 METTL4Q8N3J2 472 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 ASB5Q8WWX0 329 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 ZNF592Q92610 1267 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 ATP6V1E2Q96A05 226 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 ADIPOR1Q96A54 375 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 SERPINI1Q99574 410 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 PELOQ9BRX2 385 aaKnown RBP10.69□□□□□ -0.7
VTI1A-208ENST00000494728 ZFP64Q9NPA5 681 aa10.69□□□□□ -0.7
VTI1A-208ENST00000494728 MTRF1LQ9UGC7 380 aaKnown RBP10.69□□□□□ -0.7
VTI1A-208ENST00000494728 ZNF180Q9UJW8 692 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms