RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 PRKCZQ05513 592 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 EGR3Q06889 387 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 CBLBQ13191 982 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ZNF177Q13360 481 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 TDGQ13569 410 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 CSHL1Q14406 222 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ZNF235Q14590 738 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 SF3A2Q15428 464 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 NTRK2Q16620 822 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 MICBQ29980 383 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 NDUFAF6Q330K2 333 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 RAB6CQ53S08 254 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 OR5M10Q6IEU7 315 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 APOBEC3HQ6NTF7 200 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 LINGO2Q7L985 606 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 FAM122BQ7Z309 247 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 CDK20Q8IZL9 346 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 PRSS35Q8N3Z0 413 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 RTL3Q8N8U3 475 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 SYT14Q8NB59 555 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 NAXEQ8NCW5 288 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DUSP18Q8NEJ0 188 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DNAAF1Q8NEP3 725 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 TRPV1Q8NER1 839 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 NLGN2Q8NFZ4 835 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 OR10D4PQ8NGN7 298 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 OR10A6Q8NH74 314 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 HAVCR2Q8TDQ0 301 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 GPR152Q8TDT2 470 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 BTN2A2Q8WVV5 523 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 IP6K1Q92551 441 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 SLC25A28Q96A46 364 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 WDR89Q96FK6 387 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 TEX37Q96LM6 180 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 RBBP8Q99708 897 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 CPNE1Q99829 537 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 MAPKAP1Q9BPZ7 522 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 NAA11Q9BSU3 229 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 NLNQ9BYT8 704 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 SLC6A16Q9GZN6 736 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 POLR1EQ9GZS1 481 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 RAB6CQ9H0N0 254 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 SDCBP2Q9H190 292 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 TREM1Q9NP99 234 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ASF1BQ9NVP2 202 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ASF1AQ9Y294 204 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 PCDHA1Q9Y5I3 950 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ZFC3H1O60293 1989 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 CACNA1FO60840 1977 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 A0A1B0GW55 424 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 TUBAL3A6NHL2 446 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 OR2AT4A6NND4 320 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 TARM1B6A8C7 271 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 IFRD1O00458 451 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 UBFD1O14562 309 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 PRRG1O14668 218 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 PHOX2AO14813 284 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 EIF3DO15371 548 aaKnown RBP eCLIP3.85□□□□□ -1.79
ATG3-207ENST00000494571 EEF1E1O43324 174 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 MBTPS2O43462 519 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 TCF21O43680 179 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 OR2T1O43869 369 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 OR1I1O60431 355 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 GRAP2O75791 330 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ANXA9O76027 345 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 VNN2O95498 520 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 MLYCDO95822 493 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ADH1AP07327 375 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DUX4L2P0CJ85 424 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DUX4L3P0CJ86 424 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DUX4L4P0CJ87 422 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DUX4L5P0CJ88 424 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DUX4L6P0CJ89 424 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DUX4L7P0CJ90 424 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ELNP15502 786 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 EPB42P16452 691 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 NFYAP23511 347 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 AKAP5P24588 427 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 PSMA1P25786 263 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 SDC2P34741 201 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 DAPP51397 102 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 STXBP1P61764 594 aaKnown RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 AP1S1P61966 158 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 NHLH2Q02577 135 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 IKZF1Q13422 519 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 PIGHQ14442 188 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 SLBPQ14493 270 aaKnown RBP eCLIP3.85□□□□□ -1.79
ATG3-207ENST00000494571 KCNAB1Q14722 419 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 HLXQ14774 488 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 SSX1Q16384 188 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ST3GAL2Q16842 350 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ATP6AP1LQ52LC2 224 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 INO80DQ53TQ3 878 aaPredicted RBP3.85□□□□□ -1.79
ATG3-207ENST00000494571 TSTD2Q5T7W7 516 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ACSM5Q6NUN0 579 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 ADAM5Q6NVV9 412 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 LPCAT3Q6P1A2 487 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 TMEM107Q6UX40 140 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 BAIAP2L2Q6UXY1 529 aa3.85□□□□□ -1.79
ATG3-207ENST00000494571 TMEM179Q6ZVK1 233 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms