RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TRILQ7L0X0 811 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 ZNF295-AS1Q8N0V1 137 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 MMP21Q8N119 569 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 LIX1Q8N485 282 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 MNS1Q8NEH6 495 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 OR5M9Q8NGP3 310 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 JSRP1Q96MG2 331 aaPredicted RBP12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 FMO2Q99518 471 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 ELOVL6Q9H5J4 265 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 PROK2Q9HC23 129 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 FARSBQ9NSD9 589 aaKnown RBP12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 TUBA8Q9NY65 449 aaPredicted RBP12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 TNFRSF10DQ9UBN6 386 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 ZNF407Q9C0G0 2248 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 HCFC1P51610 2035 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 TRGV5A0A0B4J1U4 118 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 A0A1B0GVC2 190 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 C2orf92A0A1B0GVN3 265 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 TRIM49D1C9J1S8 452 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 POC1B-GALNT4F8VUJ3 575 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 TP53I11O14683 189 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 WDR1O75083 606 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 LRATO95237 230 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 RPS17P08708 135 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 HOXD4P09016 255 aaPredicted RBP12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 CT62P0C5K7 136 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 GABRA1P14867 456 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 KRT15P19012 456 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 SOX18P35713 384 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 PIGAP37287 484 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 TMED10P49755 219 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 NRG3P56975 720 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 TLE4Q04727 773 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 CCNYL2Q5T2Q4 361 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 FRG2Q64ET8 278 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 TMEM198Q66K66 360 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 LETMD1Q6P1Q0 360 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 B3GNT6Q6ZMB0 384 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 MILR1Q7Z6M3 343 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 CLYBLQ8N0X4 340 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 LRRN4CLQ8ND94 238 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 MYRIPQ8NFW9 859 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 OR4K14Q8NGD5 310 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 PAQR8Q8TEZ7 354 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 FRG2BQ96QU4 278 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 NTMT1Q9BV86 223 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 MRPL1Q9BYD6 325 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 WWTR1Q9GZV5 400 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 ZFP64Q9NPA5 681 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 NMRK1Q9NWW6 199 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 QPCTLQ9NXS2 382 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 ALKBH4Q9NXW9 302 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 ITGB1BP2Q9UKP3 347 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 ADGRG4Q8IZF6 3080 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 OTOGQ6ZRI0 2925 aa12.34□□□□□ -0.43
CTDSP1-212ENST00000494067 GOLGA6L10A6NI86 522 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 A8MT66 165 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 OTCP00480 354 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 FAM153BP0C7A2 387 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 RFPL3SP0C7P2 107 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 ENDOUP21128 410 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 DEKP35659 375 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 ZFP36L2P47974 494 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 CDH13P55290 713 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 SLC37A1P57057 533 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 NUP107P57740 925 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 DUSP2Q05923 314 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 EBPQ15125 230 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 FAM153CQ494X1 144 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 TCHHL1Q5QJ38 904 aaPredicted RBP12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 PRAMEF20Q5VT98 475 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 TMEM64Q6YI46 380 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 GALNT12Q8IXK2 581 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 FBXW8Q8N3Y1 598 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF441Q8N8Z8 693 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 ACBD4Q8NC06 268 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 SIMC1Q8NDZ2 872 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 OR4F6Q8NGB9 312 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF483Q8TF39 744 aaPredicted RBP12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 TP53INP1Q96A56 240 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 TTYH2Q9BSA4 534 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 DOHHQ9BU89 302 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 EPB41L4BQ9H329 900 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF180Q9UJW8 692 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 ADAM29Q9UKF5 820 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 SNX6Q9UNH7 406 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 PHF3Q92576 2039 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 MYO9AB2RTY4 2548 aa12.33□□□□□ -0.44
CTDSP1-212ENST00000494067 AKAP9Q99996 3911 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 A0A087WUV0 522 aaPredicted RBP12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 NKX2-6A6NCS4 301 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 LRRC3CA6NJW4 275 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 KLK1P06870 262 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 FBXO45P0C2W1 286 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 CTAGE8P0CG41 777 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 NT5EP21589 574 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 SSTR4P31391 388 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 MAPK12P53778 367 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms