RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 HMGN2P05204 90 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 SMIM18P0DKX4 95 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 NR2F1P10589 423 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 CPMP14384 443 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ITGA2P17301 1181 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 CD247P20963 164 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ARRB1P49407 418 aaPredicted RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 XKP51811 444 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 CRISP3P54108 245 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 RAD23AP54725 363 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ADARB1P78563 741 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 PPP1R8Q12972 351 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 GK3PQ14409 553 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 USP53Q70EK8 1073 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 KRT73Q86Y46 540 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 APLFQ8IW19 511 aaPredicted RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 SLC35F3Q8IY50 421 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 HS3ST5Q8IZT8 346 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 CARFQ8N187 725 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 TTC29Q8NA56 475 aaPredicted RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 OR5T3Q8NGG3 340 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 OR5D16Q8NGK9 328 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ADAMTS18Q8TE60 1221 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 RASSF5Q8WWW0 418 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 GAB3Q8WWW8 586 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 NCSTNQ92542 709 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 KAT2AQ92830 837 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 TANKQ92844 425 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 FBXL20Q96IG2 436 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ZNF285Q96NJ3 590 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 MS4A4EQ96PG1 132 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ZNF607Q96SK3 696 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 ELF4Q99607 663 aaPredicted RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 EPYCQ99645 322 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 SMURF2Q9HAU4 748 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 PDE7BQ9NP56 450 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 STARD5Q9NSY2 213 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 TMEM74BQ9NUR3 256 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 EXD2Q9NVH0 621 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 DDX18Q9NVP1 670 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 IRAK4Q9NWZ3 460 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 KIF17Q9P2E2 1029 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 LRIT1Q9P2V4 623 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 C3orf18Q9UK00 162 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 CLCA2Q9UQC9 943 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 PCDHGB5Q9Y5G0 923 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 U3KQV3 271 aa8.6□□□□□ -1.03
SMARCC1-208ENST00000492896 IGHV1OR21-1A0A087WYE8 117 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 A6NHS1 94 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 CYR61O00622 381 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 KIF1CO43896 1103 aaKnown RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 FGF17O60258 216 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 DNAJB6O75190 326 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 SERPINB7O75635 380 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 DNAJB5O75953 348 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 SLITRK5O94991 958 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 MFN2O95140 757 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 BMP10O95393 424 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 ZBTB11O95625 1053 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 GPR75O95800 540 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 IFNW1P05000 195 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 CTSBP07858 339 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 IFI6P09912 130 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 GLB1P16278 677 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 PORP16435 677 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 CDH2P19022 906 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 TNFRSF1BP20333 461 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 NT5EP21589 574 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 IGFBP5P24593 272 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 EPHA8P29322 1005 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 ALDH4A1P30038 563 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 RRM2P31350 389 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 GPR3P46089 330 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 GABRA4P48169 554 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 TPD52P55327 224 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 OR1D5P58170 312 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 GPLD1P80108 840 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 SPIBQ01892 262 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 BNC1Q01954 994 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 ID2Q02363 134 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 KCNC4Q03721 635 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 BNIP3Q12983 259 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 SRSF5Q13243 272 aaKnown RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 NR1D2Q14995 579 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 SHBQ15464 509 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 MAPK11Q15759 364 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 SYPL1Q16563 259 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 INAVAQ3KP66 663 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 ZIK1Q3SY52 487 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 IQCCQ4KMZ1 466 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 ZNF628Q5EBL2 1059 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 TCTE1Q5JU00 501 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 ATAD3BQ5T9A4 648 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 GARNL3Q5VVW2 1013 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 PRAMEF8Q5VWM4 474 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 PRAMEF7Q5VXH5 474 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 NKAIN2Q5VXU1 208 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 TTC23Q5W5X9 447 aa8.59□□□□□ -1.03
SMARCC1-208ENST00000492896 FAM111BQ6SJ93 734 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms