RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 E7EWF7 191 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NEDD8-MDP1E9PL57 170 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 E9PQ18 207 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LEFTY2O00292 366 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CCRL2O00421 344 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SURF4O15260 269 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 AQP9O43315 295 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC28A2O43868 658 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TOM1O60784 492 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SDC3O75056 442 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 OR6A2O95222 327 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZWINTO95229 277 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ACSL3O95573 720 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 IFNA2P01563 188 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PPBPP02775 128 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RAF1P04049 648 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 AMY1AP04745 511 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 KLK3P07288 261 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GSTA1P08263 222 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 HSPD1P10809 573 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ARSAP15289 507 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 H2AFXP16104 143 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NDUFB7P17568 137 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 KCNA3P22001 575 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 FDXRP22570 491 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ITGA3P26006 1051 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ELK4P28324 431 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 HOXD9P28356 352 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LAP3P28838 519 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GTF2E2P29084 291 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MARCKSP29966 332 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 OTX1P32242 354 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 UGT2B10P36537 528 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 AVPR1AP37288 418 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RAB13P51153 203 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 EPHA5P54756 1037 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PCBP4P57723 403 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 EGR4Q05215 589 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ORC2Q13416 577 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TFDP1Q14186 410 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC1A5Q15758 541 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SMN1Q16637 294 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 UGCGQ16739 394 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LRRC36Q1X8D7 754 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZIK1Q3SY52 487 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 COX19Q49B96 90 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TIGD5Q53EQ6 642 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MANEALQ5VSG8 457 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM198Q66K66 360 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RHBDD2Q6NTF9 364 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 C11orf63Q6NUN7 778 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC39A4Q6P5W5 647 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TEX38Q6PEX7 206 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CBLN3Q6UW01 205 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 B3GLCTQ6Y288 498 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM17Q86X19 198 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 FOXP4Q8IVH2 680 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC35F3Q8IY50 421 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GPC2Q8N158 579 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GABRG1Q8N1C3 465 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PQLC1Q8N2U9 271 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 FBXO39Q8N4B4 442 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CATSPER1Q8NEC5 780 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NUBPLQ8TB37 319 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NETO1Q8TDF5 533 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PPP1R13LQ8WUF5 828 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF480Q8WV37 535 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NUDCD2Q8WVJ2 157 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RNF133Q8WVZ7 376 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 EDARADDQ8WWZ3 215 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SORCS1Q8WY21 1168 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 HAS1Q92839 578 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM45BQ96B21 275 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 STAMBPL1Q96FJ0 436 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 IGSF21Q96ID5 467 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 DCAF5Q96JK2 942 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 WFIKKN1Q96NZ8 548 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC22A12Q96S37 553 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 UBL7Q96S82 380 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CDCA3Q99618 268 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NAPGQ99747 312 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NIPSNAP1Q9BPW8 284 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 C2orf88Q9BSF0 95 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 C20orf24Q9BUV8 137 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PRDM14Q9GZV8 571 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC25A32Q9H2D1 315 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 FAM83DQ9H4H8 585 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 EPHX3Q9H6B9 360 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GBA2Q9HCG7 927 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PAK6Q9NQU5 681 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 DYRK4Q9NR20 520 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 C20orf141Q9NUB4 165 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MIOSQ9NXC5 875 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GIN1Q9NXP7 522 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 USE1Q9NZ43 259 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NCKIPSDQ9NZQ3 722 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RBPJLQ9UBG7 517 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SMPXQ9UHP9 88 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 KCNJ14Q9UNX9 436 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PIGLQ9Y2B2 252 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms