RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NUBPLQ8TB37 319 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 SLC22A8Q8TCC7 542 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 TCP10LQ8TDR4 215 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 TANKQ92844 425 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 RGMAQ96B86 450 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 L3HYPDHQ96EM0 354 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 RBM18Q96H35 190 aaKnown RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 APOPT1Q96IL0 206 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 FRG2BQ96QU4 278 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 RASL10BQ96S79 203 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 MAPKAP1Q9BPZ7 522 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 TREX2Q9BQ50 279 aaPredicted RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 OR8D2Q9GZM6 311 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 GSTO2Q9H4Y5 243 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 ZDHHC11Q9H8X9 412 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 IL1RL2Q9HB29 575 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 MCCC2Q9HCC0 563 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 KCNJ16Q9NPI9 418 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 SACM1LQ9NTJ5 587 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 ZNF223Q9UK11 482 aaPredicted RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 TSC22D4Q9Y3Q8 395 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 CLDN16Q9Y5I7 305 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 ADGRG4Q8IZF6 3080 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 TACC2O95359 2948 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 DCHS2Q6V1P9 2916 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 MYOCOSA0A1B0GUC4 107 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 C17orf105B2RV13 164 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 FOXE1O00358 373 aaPredicted RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 EBAG9O00559 213 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 PLPP1O14494 284 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 UBFD1O14562 309 aaKnown RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 ADAM10O14672 748 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 EEDO75530 441 aaKnown RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 WISP2O76076 250 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 PDYNP01213 254 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 IGHG3P01860 377 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 CPN2P22792 545 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 BSGP35613 385 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 SOX3P41225 446 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 ST13P50502 369 aaKnown RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 RAP1GDS1P52306 607 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 HK2P52789 917 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 RIPPLY3P57055 190 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 DNAJB13P59910 316 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 GPR85P60893 370 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 RNF4P78317 190 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 HSF1Q00613 529 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 IFT88Q13099 833 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 SLAMF1Q13291 335 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 HYAL4Q2M3T9 481 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 TCHHL1Q5QJ38 904 aaPredicted RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 C10orf62Q5T681 223 aaPredicted RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 LRIG3Q6UXM1 1119 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 MEX3BQ6ZN04 569 aaKnown RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 GPRIN3Q6ZVF9 776 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 CLNKQ7Z7G1 428 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 EXOC3L1Q86VI1 746 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 CLYBLQ8N0X4 340 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 ARFGAP2Q8N6H7 521 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 OR5M3Q8NGP4 307 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 RDH11Q8TC12 318 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 METTL6Q8TCB7 284 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 SLC2A12Q8TD20 617 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 PTPMT1Q8WUK0 201 aaPredicted RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 SARAFQ96BY9 339 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 CCDC126Q96EE4 140 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 DGAT2Q96PD7 388 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 FAM111AQ96PZ2 611 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 SMC6Q96SB8 1091 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 ZNF382Q96SR6 550 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 SHCBP1LQ9BZQ2 653 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 IQCGQ9H095 443 aaKnown RBP9.59□□□□□ -0.87
TTC28-207ENST00000490475 ELOVL6Q9H5J4 265 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 WDR41Q9HAD4 459 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 TIMM22Q9Y584 194 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 PCDHGB3Q9Y5G1 929 aa9.59□□□□□ -0.87
TTC28-207ENST00000490475 A0A1B0GVC2 190 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 WASHC1A8K0Z3 465 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 CAPN14A8MX76 684 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 HMGB1P1B2RPK0 211 aaPredicted RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 WWP2O00308 870 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 MANBAO00462 879 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 TYROBPO43914 113 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 HCN1O60741 890 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 WDR1O75083 606 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 OR6B1O95007 311 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 GBAP04062 536 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 GABRA1P14867 456 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 ALDH3A1P30838 453 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 GALNSP34059 522 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 KIR3DL1P43629 444 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 STT3AP46977 705 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 FOXA1P55317 472 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 IGLV3-21P80748 117 aaPredicted RBP9.58□□□□□ -0.88
TTC28-207ENST00000490475 TLE4Q04727 773 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 LCP2Q13094 533 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 CUL3Q13618 768 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 SLC10A1Q14973 349 aa9.58□□□□□ -0.88
TTC28-207ENST00000490475 PCLAFQ15004 111 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms