RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RHBDD2Q6NTF9 364 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 ARMCX5Q6P1M9 558 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 ASRGL1Q7L266 308 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 GPR142Q7Z601 462 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 SLC22A16Q86VW1 577 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 BATF2Q8N1L9 274 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 LEMD2Q8NC56 503 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 CCNYQ8ND76 341 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 TMEM185AQ8NFB2 350 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 BEST4Q8NFU0 473 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 HIST1H2ACQ93077 130 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 ANKRD9Q96BM1 317 aaPredicted RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 RUFY1Q96T51 708 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 DCTPP1Q9H773 170 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 COPS7AQ9UBW8 275 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 TUBGCP4Q9UGJ1 667 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 FETUBQ9UGM5 382 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 MRPL11Q9Y3B7 192 aaKnown RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 ATG4BQ9Y4P1 393 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 ABCC9O60706 1549 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 SH2D1BO14796 132 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 LRP3O75074 770 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 SYNGR4O95473 234 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 RENP00797 406 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 FCGR3AP08637 254 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 AHCYP23526 432 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
CD46-216ENST00000490278 PPP2R1BP30154 601 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 PTGER3P43115 390 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 ZNF131P52739 623 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 LMO4P61968 165 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 HAGHQ16775 308 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 PCK2Q16822 640 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 HIGD2BQ4VC39 106 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 CMPK2Q5EBM0 449 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 VWA2Q5GFL6 755 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 HERC4Q5GLZ8 1057 aaPredicted RBP3.11□□□□□ -1.91
CD46-216ENST00000490278 ZNF506Q5JVG8 444 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 REP15Q6BDI9 236 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 MIER3Q7Z3K6 550 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 BNIPLQ7Z465 357 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 ADAMTSL2Q86TH1 951 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 COLGALT1Q8NBJ5 622 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 CCDC47Q96A33 483 aaKnown RBP3.11□□□□□ -1.91
CD46-216ENST00000490278 PYGO2Q9BRQ0 406 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 RPP25Q9BUL9 199 aaKnown RBP3.11□□□□□ -1.91
CD46-216ENST00000490278 ABCG8Q9H221 673 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 Q9HAA7 133 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 ELL3Q9HB65 397 aaPredicted RBP3.11□□□□□ -1.91
CD46-216ENST00000490278 HPS4Q9NQG7 708 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 HOMER3Q9NSC5 361 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 ANO10Q9NW15 660 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 KCNN3Q9UGI6 736 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 ENTPD4Q9Y227 616 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 SLC6A5Q9Y345 797 aa3.11□□□□□ -1.91
CD46-216ENST00000490278 FOXI3A8MTJ6 420 aaPredicted RBP3.1□□□□□ -1.91
CD46-216ENST00000490278 SH3BGRLO75368 114 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 HPP00738 406 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 FOLR2P14207 255 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 TAF6P49848 677 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 CCL11P51671 97 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 NLRP11P59045 1033 aaKnown RBP3.1□□□□□ -1.91
CD46-216ENST00000490278 CYLC2Q14093 348 aaPredicted RBP3.1□□□□□ -1.91
CD46-216ENST00000490278 CARTPTQ16568 116 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 SHROOM1Q2M3G4 852 aaPredicted RBP3.1□□□□□ -1.91
CD46-216ENST00000490278 HKDC1Q2TB90 917 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 ANKRD55Q3KP44 614 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 SEL1L3Q68CR1 1132 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 LEMD1Q68G75 181 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 RFWD3Q6PCD5 774 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 CWC27Q6UX04 472 aaKnown RBP3.1□□□□□ -1.91
CD46-216ENST00000490278 FGFRL1Q8N441 504 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 OR52E1Q8NGJ3 308 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 KIAA1524Q8TCG1 905 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 SLC13A3Q8WWT9 602 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 P3H4Q92791 437 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 WBP1Q96G27 269 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 FOXN4Q96NZ1 517 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 C19orf43Q9BQ61 176 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 IL1RL2Q9HB29 575 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 SYTL2Q9HCH5 934 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 TAS2R16Q9NYV7 291 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 SEC14L4Q9UDX3 406 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 CIDEBQ9UHD4 219 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 DNPEPQ9ULA0 475 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 RPH3AQ9Y2J0 694 aaPredicted RBP3.1□□□□□ -1.91
CD46-216ENST00000490278 AFF2P51816 1311 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 FAM205AQ6ZU69 1335 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 NPC1L1Q9UHC9 1359 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 FER1L5A0AVI2 2057 aa3.1□□□□□ -1.91
CD46-216ENST00000490278 A0A0A6YYD4 124 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 CYSRT1A8MQ03 144 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 SRRM5B3KS81 715 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 HTATSF1O43719 755 aaKnown RBP3.09□□□□□ -1.91
CD46-216ENST00000490278 SLC4A1P02730 911 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 CXCL10P02778 98 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 PGK2P07205 417 aa3.09□□□□□ -1.91
CD46-216ENST00000490278 MELTFP08582 738 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms