RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 CEACAM8P31997 349 aaPredicted RBP11.37□□□□□ -0.59
CPSF3-204ENST00000489403 GALNSP34059 522 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 ASCL1P50553 236 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 DUSP8Q13202 625 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 RPS6KA2Q15349 733 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 TBCELQ5QJ74 424 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 TMEM198Q66K66 360 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 BICRALQ6AI39 1079 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 POMZP3Q6PJE2 187 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 TMEM64Q6YI46 380 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 TGIF2LYQ8IUE0 185 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 TNIP2Q8NFZ5 429 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 RHEBL1Q8TAI7 183 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 WDR20Q8TBZ3 569 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 FBF1Q8TES7 1133 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 DIO2Q92813 273 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 DDX31Q9H8H2 851 aaKnown RBP11.37□□□□□ -0.59
CPSF3-204ENST00000489403 ACTR8Q9H981 624 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 ANGPTL3Q9Y5C1 460 aa11.37□□□□□ -0.59
CPSF3-204ENST00000489403 PRRC2AP48634 2157 aaKnown RBP11.37□□□□□ -0.59
CPSF3-204ENST00000489403 C2orf92A0A1B0GVN3 265 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 ANKRD33BA6NCL7 494 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 AHRRA9YTQ3 701 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 DVL2O14641 736 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 PGRMC2O15173 223 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 UGDHO60701 494 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 EPPINO95925 133 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 GBAP04062 536 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 CT62P0C5K7 136 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 SLC35E2P0CK97 266 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 GFAPP14136 432 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 PTX3P26022 381 aaPredicted RBP11.36□□□□□ -0.59
CPSF3-204ENST00000489403 STX2P32856 288 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 TIMP3P35625 211 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 PEX19P40855 299 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 FBXW4P57775 412 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 PHEXP78562 749 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 C2orf54Q08AI8 447 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 CUL3Q13618 768 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 CEBPEQ15744 281 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 CPSF6Q16630 551 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPSF3-204ENST00000489403 PFKFB4Q16877 469 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 FBXL19-AS1Q494R0 122 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 FLYWCH1Q4VC44 716 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 FNDC7Q5VTL7 733 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 CYP20A1Q6UW02 462 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 MAATS1Q7Z4T9 603 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 GOLGA7Q7Z5G4 137 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 LACC1Q8IV20 430 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 TAGAPQ8N103 731 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 SPATA4Q8NEY3 305 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 FBXO25Q8TCJ0 367 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 SPPL2AQ8TCT8 520 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 RNASE6Q93091 150 aaKnown RBP11.36□□□□□ -0.59
CPSF3-204ENST00000489403 TP53INP1Q96A56 240 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 REPS1Q96D71 796 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 RMND5BQ96G75 393 aaPredicted RBP11.36□□□□□ -0.59
CPSF3-204ENST00000489403 RILPQ96NA2 401 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 TIMP4Q99727 224 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 UBQLN3Q9H347 655 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 WDR41Q9HAD4 459 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 SNX15Q9NRS6 342 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 TEX10Q9NXF1 929 aaPredicted RBP11.36□□□□□ -0.59
CPSF3-204ENST00000489403 CBLCQ9ULV8 474 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 PLEKHA6Q9Y2H5 1048 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 ACOT9Q9Y305 439 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 NPFFR2Q9Y5X5 522 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 IKBKGQ9Y6K9 419 aa11.36□□□□□ -0.59
CPSF3-204ENST00000489403 NF1P21359 2839 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 A0A087X1B8 175 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 A6NNC1 897 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 TP53I11O14683 189 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 C2P06681 752 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 KLK2P20151 261 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 PIK3CGP48736 1102 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 CDK9P50750 372 aaKnown RBP11.35□□□□□ -0.59
CPSF3-204ENST00000489403 NEK2P51955 445 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 ZNF136P52737 540 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 ALDH18A1P54886 795 aaKnown RBP11.35□□□□□ -0.59
CPSF3-204ENST00000489403 PLTPP55058 493 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 NAB1Q13506 487 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 GTF2H2Q13888 395 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 PCBP2Q15366 365 aaKnown RBP eCLIP11.35□□□□□ -0.59
CPSF3-204ENST00000489403 OR52E8Q6IFG1 317 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 GTF2H2CQ6P1K8 395 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 CCDC25Q86WR0 208 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 NUDT13Q86X67 352 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 CDC20BQ86Y33 519 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 GALNT12Q8IXK2 581 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 PM20D2Q8IYS1 436 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 ZNF615Q8N8J6 731 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 L3MBTL4Q8NA19 623 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 CHDHQ8NE62 594 aaPredicted RBP11.35□□□□□ -0.59
CPSF3-204ENST00000489403 ADIPOR1Q96A54 375 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 ANGPTL4Q9BY76 406 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 IPPKQ9H8X2 491 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 CXorf21Q9HAI6 301 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 GRPEL1Q9HAV7 217 aa11.35□□□□□ -0.59
CPSF3-204ENST00000489403 PSD3Q9NYI0 1048 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms