RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TEX19Q8NA77 164 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 MDS2Q8NDY4 140 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 NUBPLQ8TB37 319 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 ACBD3Q9H3P7 528 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 CDCP1Q9H5V8 836 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 COPS7AQ9UBW8 275 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 PSME2Q9UL46 239 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 ERVK-19Q9WJR5 959 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 PCDHGA10Q9Y5H3 936 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 DNAJC13O75165 2243 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 GABRR3A8MPY1 467 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 MYO1GB0I1T2 1018 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 PEX11AO75192 247 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 ZFAND5O76080 213 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 TNNI3P19429 210 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 FEN1P39748 380 aaKnown RBP17.31■□□□□ 0.36
PTCD3-217ENST00000488801 ASMTP46597 345 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 C21orf58P58505 322 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 C19orf57Q0VDD7 668 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 DUSP8Q13202 625 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 TUBA3CQ13748 450 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 ESPL1Q14674 2120 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 PLEKHN1Q494U1 663 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF628Q5EBL2 1059 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 TUBA3EQ6PEY2 450 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 HSDL2Q6YN16 418 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF227Q86WZ6 799 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 TICAM1Q8IUC6 712 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF615Q8N8J6 731 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF441Q8N8Z8 693 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 EXOSC8Q96B26 276 aaKnown RBP17.31■□□□□ 0.36
PTCD3-217ENST00000488801 C7orf26Q96N11 449 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 TSSK3Q96PN8 268 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 EPN3Q9H201 632 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 SLAMF7Q9NQ25 335 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 PFDN4Q9NQP4 134 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 PLA2G3Q9NZ20 509 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 STMN3Q9NZ72 180 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 MYOTQ9UBF9 498 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 POLEQ07864 2286 aa17.31■□□□□ 0.36
PTCD3-217ENST00000488801 MYO18BQ8IUG5 2567 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 DYTNA2CJ06 578 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 OR6C76A6NM76 312 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 SDHDO14521 159 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF195O14628 629 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 DYRK3O43781 588 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 CBX7O95931 251 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 MAPK1P28482 360 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 SSTR4P31391 388 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 FRKP42685 505 aaPredicted RBP17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ARG2P78540 354 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 EMX2Q04743 252 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF267Q14586 743 aaPredicted RBP17.3■□□□□ 0.36
PTCD3-217ENST00000488801 PTGR1Q14914 329 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF169Q14929 603 aaPredicted RBP17.3■□□□□ 0.36
PTCD3-217ENST00000488801 EBPQ15125 230 aaKnown RBP17.3■□□□□ 0.36
PTCD3-217ENST00000488801 TLR1Q15399 786 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 LTB4RQ15722 352 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 MPEG1Q2M385 716 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF385BQ569K4 471 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF468Q5VIY5 522 aaPredicted RBP17.3■□□□□ 0.36
PTCD3-217ENST00000488801 OGFOD2Q6N063 350 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 LARP4Q71RC2 724 aaKnown RBP eCLIP17.3■□□□□ 0.36
PTCD3-217ENST00000488801 MAVSQ7Z434 540 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 VWA5B2Q8N398 1253 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 CATSPER1Q8NEC5 780 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 TUBGCP3Q96CW5 907 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ERP27Q96DN0 273 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 MTERF3Q96E29 417 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 MAELQ96JY0 434 aaKnown RBP17.3■□□□□ 0.36
PTCD3-217ENST00000488801 C1orf50Q9BV19 199 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 CNPPD1Q9BV87 410 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 MFRPQ9BY79 579 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 NUF2Q9BZD4 464 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 REEP4Q9H6H4 257 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 AKTIPQ9H8T0 292 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 PCDHGB6Q9Y5F9 930 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF780BQ9Y6R6 833 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF407Q9C0G0 2248 aa17.3■□□□□ 0.36
PTCD3-217ENST00000488801 HDAC3O15379 428 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF354AO60765 605 aaPredicted RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 ITGA10O75578 1167 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 NEURL1O76050 574 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 NADKO95544 446 aaPredicted RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 IFI6P09912 130 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 PRPS2P11908 318 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 MAD2L1Q13257 205 aaPredicted RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 COLEC12Q5KU26 742 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 FHL5Q5TD97 284 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 RPUSD3Q6P087 351 aaKnown RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 RNF111Q6ZNA4 994 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 RGS9BPQ6ZS82 235 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 RIMKLAQ8IXN7 391 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 LIX1Q8N485 282 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 FNDC5Q8NAU1 212 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 OR7G1Q8NGA0 311 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 CDC26Q8NHZ8 85 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 PIWIL2Q8TC59 973 aaKnown RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 DOK4Q8TEW6 326 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 SCMH1Q96GD3 660 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms