RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PDPK1O15530 556 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 KLHL41O60662 606 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 F10P00742 488 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 IGKV3-11P04433 115 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 ATP1B1P05026 303 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 PRPS2P11908 318 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 ICAM2P13598 275 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 PCSK2P16519 638 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 CD97P48960 835 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 IDH3AP50213 366 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 NCBP2P52298 156 aaKnown RBP eCLIP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 GYS2P54840 703 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 SF3A3Q12874 501 aaKnown RBP eCLIP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 EXOSC7Q15024 291 aaKnown RBP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 MPEG1Q2M385 716 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 SMU1Q2TAY7 513 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 LSM12Q3MHD2 195 aaKnown RBP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 LACTB2Q53H82 288 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF628Q5EBL2 1059 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 COLEC12Q5KU26 742 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 C6orf163Q5TEZ5 329 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 AGAP7PQ5VUJ5 663 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 CGB2Q6NT52 195 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 JMJD6Q6NYC1 403 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 FAM111BQ6SJ93 734 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 C16orf47Q6ZP98 133 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 C9orf40Q8IXQ3 194 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 CCDC116Q8IYX3 515 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 FAM9CQ8IZT9 166 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 VWA5B2Q8N398 1253 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 SIMC1Q8NDZ2 872 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 OR1N1Q8NGS0 311 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 RFWD2Q8NHY2 731 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 ACTRT2Q8TDY3 377 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 KAT2AQ92830 837 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 AGAP4Q96P64 663 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 BBS4Q96RK4 519 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 GAL3ST4Q96RP7 486 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 CCDC134Q9H6E4 229 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 ANKRA2Q9H9E1 313 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 TCF7L2Q9NQB0 619 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 COPS7AQ9UBW8 275 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 TUBD1Q9UJT1 453 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 DCTN4Q9UJW0 460 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 PSME2Q9UL46 239 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 WBP11Q9Y2W2 641 aaKnown RBP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 PRRC2CQ9Y520 2896 aaKnown RBP10.28□□□□□ -0.76
UBE4B-210ENST00000488228 GABRR3A8MPY1 467 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 MYO1GB0I1T2 1018 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ANKRD28O15084 1053 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 POLR3GO15318 223 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 DYRK3O43781 588 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 NME6O75414 186 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ALPPP05187 535 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 VIMP08670 466 aaKnown RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 LAMP1P11279 417 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 GALNSP34059 522 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 SOX18P35713 384 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 MC3RP41968 323 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 CLCN2P51788 898 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 AP2B1P63010 937 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 MGAT2Q10469 447 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 HSPB3Q12988 150 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 DUSP8Q13202 625 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 CEBPEQ15744 281 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 PRICKLE4Q2TBC4 344 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 CRB2Q5IJ48 1285 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 TCTN3Q6NUS6 607 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 TMEM107Q6UX40 140 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ISLR2Q6UXK2 745 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 RNF111Q6ZNA4 994 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ASB18Q6ZVZ8 466 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ACAD11Q709F0 780 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF551Q7Z340 670 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 RIMKLAQ8IXN7 391 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 LRRC34Q8IZ02 419 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 BEST3Q8N1M1 668 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 SLC5A8Q8N695 610 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF764Q96H86 408 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 SENP5Q96HI0 755 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ART5Q96L15 291 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 AMDHD1Q96NU7 426 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 SMAD5Q99717 465 aaKnown RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 DEFB126Q9BYW3 111 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 GLIPR2Q9H4G4 154 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 LIN28AQ9H9Z2 209 aaKnown RBP10.27□□□□□ -0.77
UBE4B-210ENST00000488228 TAS2R7Q9NYW3 318 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 SH3BP4Q9P0V3 963 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 ATP6V1HQ9UI12 483 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 DTX4Q9Y2E6 619 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 CSAG2Q9Y5P2 127 aa10.27□□□□□ -0.77
UBE4B-210ENST00000488228 A0A0G2JND7 137 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 TBX19O60806 448 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 TGDSO95455 350 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 CBX7O95931 251 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 PRPS1L1P21108 318 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 RPL3P39023 403 aaKnown RBP10.26□□□□□ -0.77
UBE4B-210ENST00000488228 CDK9P50750 372 aaKnown RBP10.26□□□□□ -0.77
UBE4B-210ENST00000488228 CLDN8P56748 225 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 SLC37A1P57057 533 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms