RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 CPSF4O95639 269 aaKnown RBP10.34□□□□□ -0.75
HDLBP-242ENST00000488013 C6orf47O95873 294 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 AGR2O95994 175 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 T-ENOLP0DO92 83 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 ICAM2P13598 275 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 MAOAP21397 527 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 MMP11P24347 488 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 HBA1P69905 142 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 MAP4K2Q12851 820 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 HSPB3Q12988 150 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 DNASE1L3Q13609 305 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 TP53BP2Q13625 1128 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 MPEG1Q2M385 716 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 TBC1D25Q3MII6 688 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 ZCCHC12Q6PEW1 402 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 SLC2A7Q6PXP3 512 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 TIPARPQ7Z3E1 657 aaKnown RBP10.34□□□□□ -0.75
HDLBP-242ENST00000488013 ANKRD46Q86W74 232 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 DTX1Q86Y01 620 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 DTWD1Q8N5C7 304 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 ENDOVQ8N8Q3 282 aaKnown RBP10.34□□□□□ -0.75
HDLBP-242ENST00000488013 MORN4Q8NDC4 146 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 TMEM52Q8NDY8 209 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 CT55Q8WUE5 264 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 ELP4Q96EB1 424 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 CGREF1Q99674 301 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 LPAR4Q99677 370 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 NPAS2Q99743 824 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 BTBD10Q9BSF8 475 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 RBCK1Q9BYM8 510 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 CXorf21Q9HAI6 301 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 DDX18Q9NVP1 670 aaKnown RBP10.34□□□□□ -0.75
HDLBP-242ENST00000488013 MAP10Q9P2G4 905 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 PRODH2Q9UF12 536 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-242ENST00000488013 TCFL5Q9UL49 500 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 PRPF19Q9UMS4 504 aaKnown RBP10.34□□□□□ -0.75
HDLBP-242ENST00000488013 L3MBTL1Q9Y468 752 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 SNX8Q9Y5X2 465 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 LOC102723996A0A087X1L8 192 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 A0A1W2PQ72 361 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 ASPDHA6ND91 283 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 DUXAA6NLW8 204 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 EMC8O43402 210 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 JRKO75564 520 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 PRKRAO75569 313 aaKnown RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 KLF7O75840 302 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 ABCB1P08183 1280 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 CHI3L1P36222 383 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 DLSTP36957 453 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 CCT3P49368 545 aaKnown RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 PRIM2P49643 509 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 OR4D2P58180 307 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 BTG2P78543 158 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 FADDQ13158 208 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 ERV3-1Q14264 604 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 EXT1Q16394 746 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 ZNF628Q5EBL2 1059 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 PAGE3Q5JUK9 113 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 SAMD4BQ5PRF9 694 aaKnown RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 TMEM205Q6UW68 189 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 DLEU7Q6UYE1 221 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 ZNF551Q7Z340 670 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 RAB43Q86YS6 212 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 TMEM151BQ8IW70 566 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 OR4N5Q8IXE1 308 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 CLECL1Q8IZS7 167 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 OR2L13Q8N349 312 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 VWA5B2Q8N398 1253 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 TNIP2Q8NFZ5 429 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 OR9A2Q8NGT5 310 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 SUN3Q8TAQ9 357 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 NKD1Q969G9 470 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 CTHRC1Q96CG8 243 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 NEURL3Q96EH8 262 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 FBXL20Q96IG2 436 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 ANKRD27Q96NW4 1050 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 SLC35A5Q9BS91 424 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 SPATA9Q9BWV2 254 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 LRMDAQ9H2I8 198 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 SOX17Q9H6I2 414 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 GPN2Q9H9Y4 310 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 TPT1P8Q9HAU6 139 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 SLAMF7Q9NQ25 335 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 NECTIN3Q9NQS3 549 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 COPS7AQ9UBW8 275 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 C19orf53Q9UNZ5 99 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-242ENST00000488013 PCDHB14Q9Y5E9 798 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 PCDHGB3Q9Y5G1 929 aa10.33□□□□□ -0.76
HDLBP-242ENST00000488013 RNF103-CHMP3A0A140T963 221 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 PMS2P1A4D2B8 440 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 TMEM247A6NEH6 219 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 OR6C76A6NM76 312 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 WASHC1A8K0Z3 465 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 C17orf105B2RV13 164 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 CLIC1O00299 241 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 PEX12O00623 359 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 PRAMEF2O60811 474 aa10.32□□□□□ -0.76
HDLBP-242ENST00000488013 SOAT1P35610 550 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms