RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ZNF267Q14586 743 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-208ENST00000485618 PCOLCEQ15113 449 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 LACTB2Q53H82 288 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-208ENST00000485618 ANXA8L1Q5VT79 327 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 METTL21CQ5VZV1 264 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 TCTN3Q6NUS6 607 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 EPGNQ6UW88 154 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 RNF111Q6ZNA4 994 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 LANCL3Q6ZV70 420 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 LARP4Q71RC2 724 aaKnown RBP eCLIP7.72□□□□□ -1.17
SF3A1-208ENST00000485618 SLC29A4Q7RTT9 530 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 TICAM1Q8IUC6 712 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 OR4N5Q8IXE1 308 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 GALNT12Q8IXK2 581 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 OR2T11Q8NH01 316 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 PTPMT1Q8WUK0 201 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-208ENST00000485618 STON2Q8WXE9 905 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 FBXL20Q96IG2 436 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 PPP1R36Q96LQ0 422 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 C3orf30Q96M34 536 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 CCDC28BQ9BUN5 200 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 NSRP1Q9H0G5 558 aaKnown RBP7.72□□□□□ -1.17
SF3A1-208ENST00000485618 CCDC134Q9H6E4 229 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 C3orf14Q9HBI5 128 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 ACSS1Q9NUB1 689 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-208ENST00000485618 TMEM45AQ9NWC5 275 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 CES1P1Q9UKY3 287 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 PTGDR2Q9Y5Y4 395 aa7.72□□□□□ -1.17
SF3A1-208ENST00000485618 CROCCQ5TZA2 2017 aa7.71□□□□□ -1.17
SF3A1-208ENST00000485618 IGHV3-20A0A0C4DH32 117 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 TTC36A6NLP5 189 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SDHDO14521 159 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 PDPK1O15530 556 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 AKAP10O43572 662 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 PRAMEF2O60811 474 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 COQ9O75208 318 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SLC22A3O75751 556 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 IL6P05231 212 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 IFI6P09912 130 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 G6PDP11413 515 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 EPHA3P29320 983 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 S100A3P33764 101 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 NCBP2P52298 156 aaKnown RBP eCLIP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 HNRNPFP52597 415 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 AQP5P55064 265 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 NRG3P56975 720 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 FOXL2P58012 376 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 C21orf58P58505 322 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 DCAF7P61962 342 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ARG2P78540 354 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 GUCY1A3Q02108 690 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ID2Q02363 134 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SRSF1Q07955 248 aaKnown RBP eCLIP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ZNHIT3Q15649 155 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 PGS1Q32NB8 556 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 VPS26BQ4G0F5 336 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 COLEC12Q5KU26 742 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 CES4AQ5XG92 561 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 FAM47EQ6ZV65 393 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ASB18Q6ZVZ8 466 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 RPS19BP1Q86WX3 136 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 GPALPP1Q8IXQ4 340 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 CCDC116Q8IYX3 515 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 DND1Q8IYX4 353 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 TAGAPQ8N103 731 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 MIER2Q8N344 545 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 VWA5B2Q8N398 1253 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SLC15A4Q8N697 577 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 TEX19Q8NA77 164 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM52Q8NDY8 209 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 FDCSPQ8NFU4 85 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SLC2A12Q8TD20 617 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF675Q8TD23 568 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ELP5Q8TE02 316 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 NCLNQ969V3 563 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 PPWD1Q96BP3 646 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 MOAP1Q96BY2 351 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ABHD17AQ96GS6 310 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SMAD5Q99717 465 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 WDR77Q9BQA1 342 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 UTP23Q9BRU9 249 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 C1orf50Q9BV19 199 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 CNPPD1Q9BV87 410 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 BRINP2Q9C0B6 783 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 BHLHE41Q9C0J9 482 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SLC25A18Q9H1K4 315 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 WDR55Q9H6Y2 383 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 CXorf21Q9HAI6 301 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SLCO1B3Q9NPD5 702 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 TCF7L2Q9NQB0 619 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 TAS2R9Q9NYW1 312 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 PTGFRNQ9P2B2 879 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 BCAP29Q9UHQ4 241 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 BAIAP2L1Q9UHR4 511 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 ATP6V1HQ9UI12 483 aa7.71□□□□□ -1.18
SF3A1-208ENST00000485618 MRTO4Q9UKD2 239 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 YARS2Q9Y2Z4 477 aaKnown RBP7.71□□□□□ -1.18
SF3A1-208ENST00000485618 SCN2AQ99250 2005 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms