RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 RDH11Q8TC12 318 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CHTF18Q8WVB6 975 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 APOPT1Q96IL0 206 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 MAGED4Q96JG8 741 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 BRINP2Q9C0B6 783 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 WWTR1Q9GZV5 400 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 IQCGQ9H095 443 aaKnown RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 CXorf21Q9HAI6 301 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 OXSMQ9NWU1 459 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 SLC17A7Q9P2U7 560 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 HEY2Q9UBP5 337 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 MCM8Q9UJA3 840 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CES1P1Q9UKY3 287 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 FIS1Q9Y3D6 152 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CACNA1CQ13936 2221 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 NBPF19A0A087WUL8 3843 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 ASNA1O43681 348 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 SLC19A2O60779 497 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 GUCY1B2O75343 617 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 CCL3P10147 92 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 PORP16435 677 aaPredicted RBP11.35□□□□□ -0.59
MSH5-216ENST00000484309 TIA1P31483 386 aaKnown RBP eCLIP11.35□□□□□ -0.59
MSH5-216ENST00000484309 DNASE1L1P49184 302 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 PER3P56645 1201 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 DNAJB13P59910 316 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 PLGLB1Q02325 96 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 ACSM2AQ08AH3 577 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 EXOSC7Q15024 291 aaKnown RBP11.35□□□□□ -0.59
MSH5-216ENST00000484309 EBPQ15125 230 aaKnown RBP11.35□□□□□ -0.59
MSH5-216ENST00000484309 LTB4RQ15722 352 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 C3AR1Q16581 482 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 IMPG1Q17R60 797 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 PIGGQ5H8A4 983 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 SPDYAQ5MJ70 313 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 C6orf163Q5TEZ5 329 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 LIPMQ5VYY2 423 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 ACSM2BQ68CK6 577 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 CLEC6AQ6EIG7 209 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 FAM111BQ6SJ93 734 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 OPN5Q6U736 354 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 RTL4Q6ZR62 310 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 GPALPP1Q8IXQ4 340 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 RIBC1Q8N443 379 aaPredicted RBP11.35□□□□□ -0.59
MSH5-216ENST00000484309 GBP7Q8N8V2 638 aaPredicted RBP11.35□□□□□ -0.59
MSH5-216ENST00000484309 BANPQ8N9N5 519 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 C7orf57Q8NEG2 295 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 ADCY4Q8NFM4 1077 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 OR2M7Q8NG81 312 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 NUBPLQ8TB37 319 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 SLC22A8Q8TCC7 542 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 CAVIN3Q969G5 261 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 FAM111AQ96PZ2 611 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 MECRQ9BV79 373 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 PARD6BQ9BYG5 372 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 PFDN4Q9NQP4 134 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.35□□□□□ -0.59
MSH5-216ENST00000484309 LGALS13Q9UHV8 139 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 DLGAP4Q9Y2H0 992 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 PTGDR2Q9Y5Y4 395 aa11.35□□□□□ -0.59
MSH5-216ENST00000484309 CACNA1DQ01668 2161 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 A0A1B0GUH1 482 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 CCDC151A5D8V7 595 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 WIPF3A6NGB9 483 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 GOLGA6L10A6NI86 522 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 CCL21O00585 134 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 PDE9AO76083 593 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 CREB1P16220 341 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 ABOP16442 354 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 GALNSP34059 522 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 CA7P43166 264 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 NNATQ16517 81 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 MPEG1Q2M385 716 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 SPIN4Q56A73 249 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 PRAMEF20Q5VT98 475 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 LYPD8Q6UX82 237 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 FAM47EQ6ZV65 393 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
MSH5-216ENST00000484309 PRR22Q8IZ63 422 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 GHDCQ8N2G8 530 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 POGLUT1Q8NBL1 392 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 SIMC1Q8NDZ2 872 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 FAM13CQ8NE31 585 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 OR52N2Q8NGI0 321 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 OR5M3Q8NGP4 307 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 C16orf78Q8WTQ4 265 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 EXOSC8Q96B26 276 aaKnown RBP11.34□□□□□ -0.59
MSH5-216ENST00000484309 CNRIP1Q96F85 164 aaPredicted RBP11.34□□□□□ -0.59
MSH5-216ENST00000484309 FAIM2Q9BWQ8 316 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 GATA5Q9BWX5 397 aaPredicted RBP11.34□□□□□ -0.59
MSH5-216ENST00000484309 DEFB127Q9H1M4 99 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 OR10A5Q9H207 317 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 SACM1LQ9NTJ5 587 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 MAT2BQ9NZL9 334 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 MID2Q9UJV3 735 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 UTS2RQ9UKP6 389 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 DTX4Q9Y2E6 619 aa11.34□□□□□ -0.59
MSH5-216ENST00000484309 PLLPQ9Y342 182 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms