RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PSMB1P20618 241 aaKnown RBP2.47□□□□□ -2.01
SCAF11-207ENST00000484275 FUT3P21217 361 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 XCR1P46094 333 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 ARHGDIBP52566 201 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 DIO3P55073 304 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 MEF2DQ14814 521 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 P2RY14Q15391 338 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 WSCD2Q2TBF2 565 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 PODNL1Q6PEZ8 512 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 PRSS48Q7RTY5 328 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 SLFN11Q7Z7L1 901 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 C17orf64Q86WR6 236 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 DZIP1Q86YF9 867 aaKnown RBP2.47□□□□□ -2.01
SCAF11-207ENST00000484275 UNC5CLQ8IV45 518 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 TPRX1Q8N7U7 411 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 UXS1Q8NBZ7 420 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 RASL10BQ96S79 203 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 PLEKHF1Q96S99 279 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 C19orf24Q9BVV8 132 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 LSG1Q9H089 658 aaKnown RBP2.47□□□□□ -2.01
SCAF11-207ENST00000484275 TTLL3Q9Y4R7 772 aa2.47□□□□□ -2.01
SCAF11-207ENST00000484275 ARHGEF37A1IGU5 675 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 SH3PXD2BA1X283 911 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 TRIM49D1C9J1S8 452 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 K7ERI5 159 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 NME6O75414 186 aaPredicted RBP2.46□□□□□ -2.02
SCAF11-207ENST00000484275 CA11O75493 328 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 SLC2A10O95528 541 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 MMP10P09238 476 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 PVRP15151 417 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 EZRP15311 586 aaKnown RBP2.46□□□□□ -2.02
SCAF11-207ENST00000484275 PPOXP50336 477 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 NUCB1Q02818 461 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 SLC3A1Q07837 685 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 SPHARQ15513 63 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 CCDC14Q49A88 953 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 SNRNP48Q6IEG0 339 aaKnown RBP2.46□□□□□ -2.02
SCAF11-207ENST00000484275 Q6ZRG5 221 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 CCDC26Q8TAB7 109 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 C17orf62Q9BQA9 187 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 JPH2Q9BR39 696 aaPredicted RBP2.46□□□□□ -2.02
SCAF11-207ENST00000484275 ZNF559Q9BR84 538 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 SLC25A39Q9BZJ4 359 aaPredicted RBP2.46□□□□□ -2.02
SCAF11-207ENST00000484275 PATZ1Q9HBE1 687 aaKnown RBP2.46□□□□□ -2.02
SCAF11-207ENST00000484275 HPS4Q9NQG7 708 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 ZNF331Q9NQX6 463 aaPredicted RBP2.46□□□□□ -2.02
SCAF11-207ENST00000484275 GPR132Q9UNW8 380 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 HIVEP2P31629 2446 aa2.46□□□□□ -2.02
SCAF11-207ENST00000484275 KBTBD13C9JR72 458 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 EEF2KO00418 725 aaKnown RBP2.45□□□□□ -2.02
SCAF11-207ENST00000484275 DFNA5O60443 496 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 IGHV3-23P01764 117 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 RLN1P04808 185 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 BDNFP23560 247 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 IER3P46695 156 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 NT5C2P49902 561 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 SERTAD2Q14140 314 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 HERPUD1Q15011 391 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 SBK1Q52WX2 424 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 MS4A13Q5J8X5 152 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 CAVIN1Q6NZI2 390 aaKnown RBP2.45□□□□□ -2.02
SCAF11-207ENST00000484275 ZNF444Q8N0Y2 327 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-207ENST00000484275 ZNF561Q8N587 486 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 RELL2Q8NC24 303 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-207ENST00000484275 GOLGA5Q8TBA6 731 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 PRCCQ92733 491 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-207ENST00000484275 BIRC7Q96CA5 298 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 STARD4Q96DR4 205 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 CAPNS2Q96L46 248 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 SSX3Q99909 188 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 NTN4Q9HB63 628 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 SLC25A19Q9HC21 320 aa2.45□□□□□ -2.02
SCAF11-207ENST00000484275 ACEP12821 1306 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 RTN2O75298 545 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 UGT1A6P19224 532 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 ZP3P21754 424 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 UCP1P25874 307 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 PTPN4P29074 926 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 CCND3P30281 292 aaPredicted RBP2.44□□□□□ -2.02
SCAF11-207ENST00000484275 RPS8P62241 208 aaKnown RBP2.44□□□□□ -2.02
SCAF11-207ENST00000484275 OR1C1Q15619 314 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 APOOLQ6UXV4 268 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 MOB2Q70IA6 237 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 AQP12AQ8IXF9 295 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 LINC01555Q8NAE3 123 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 SPATA18Q8TC71 538 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 CKAP2Q8WWK9 683 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 DNASE1L2Q92874 299 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 PFDN4Q9NQP4 134 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 DNAJC11Q9NVH1 559 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 TECRQ9NZ01 308 aaKnown RBP2.44□□□□□ -2.02
SCAF11-207ENST00000484275 PSORS1C1Q9UIG5 152 aa2.44□□□□□ -2.02
SCAF11-207ENST00000484275 IGLV3-16A0A075B6K0 115 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 TRAV34A0A0B4J273 112 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 YDJCA8MPS7 323 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 ERVV-1B6SEH8 477 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 WISP3O95389 354 aaPredicted RBP2.43□□□□□ -2.02
SCAF11-207ENST00000484275 CT45A10P0DMU9 189 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 HNRNPA2B1P22626 353 aaKnown RBP2.43□□□□□ -2.02
SCAF11-207ENST00000484275 ACP1P24666 158 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms