RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ITPR3Q14573 2671 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 UGDHO60701 494 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 CLDN9O95484 217 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 KLK1P06870 262 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 SLC35E2P0CK97 266 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 BUD31P41223 144 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-221ENST00000483778 ARFIP1P53367 373 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 WNT3P56703 355 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 FBXW4P57775 412 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 BIKQ13323 160 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 SGO1Q5FBB7 561 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 C1orf185Q5T7R7 199 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 DESI1Q6ICB0 168 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 SLC29A4Q7RTT9 530 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 LRRC25Q8N386 305 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-221ENST00000483778 ZNF615Q8N8J6 731 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 SIMC1Q8NDZ2 872 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 ART5Q96L15 291 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 CENPKQ9BS16 269 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 MRPL1Q9BYD6 325 aaKnown RBP16.55■□□□□ 0.24
ATG4B-221ENST00000483778 ACSS3Q9H6R3 686 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 EXO5Q9H790 373 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 PSD3Q9NYI0 1048 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 DMGDHQ9UI17 866 aaKnown RBP16.55■□□□□ 0.24
ATG4B-221ENST00000483778 PCTPQ9UKL6 214 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 PCNX3Q9H6A9 2034 aa16.55■□□□□ 0.24
ATG4B-221ENST00000483778 HCN1O60741 890 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 TRIM3O75382 744 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-221ENST00000483778 SBK3P0C264 359 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 TSPAN8P19075 237 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 S1PR1P21453 382 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 SOX18P35713 384 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 MAGEA12P43365 314 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 ZFP36L2P47974 494 aaKnown RBP16.54■□□□□ 0.24
ATG4B-221ENST00000483778 SERPINB8P50452 374 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 TRAF3Q13114 568 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 NTRK2Q16620 822 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 WLSQ5T9L3 541 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 FNDC7Q5VTL7 733 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 CCDC91Q7Z6B0 441 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 PRR22Q8IZ63 422 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 SLC44A1Q8WWI5 657 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 ANP32BQ92688 251 aaKnown RBP16.54■□□□□ 0.24
ATG4B-221ENST00000483778 ADIPOR1Q96A54 375 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 REPS1Q96D71 796 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 CNIH4Q9P003 139 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 DTX4Q9Y2E6 619 aa16.54■□□□□ 0.24
ATG4B-221ENST00000483778 MTORP42345 2549 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 FIGNL2A6NMB9 653 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 DYRK3O43781 588 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 ACSL3O95573 720 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 SERPINB3P29508 390 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 GALNSP34059 522 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 DUSP2Q05923 314 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 KLC3Q6P597 504 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 TMEM151AQ8N4L1 468 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 UHMK1Q8TAS1 419 aaKnown RBP16.53■□□□□ 0.24
ATG4B-221ENST00000483778 NEIL3Q8TAT5 605 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 ATP6V1E2Q96A05 226 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 SARAFQ96BY9 339 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 SERPINI1Q99574 410 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 NTMT1Q9BV86 223 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 ACKR4Q9NPB9 350 aa16.53■□□□□ 0.24
ATG4B-221ENST00000483778 BOKQ9UMX3 212 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-221ENST00000483778 TNPO3Q9Y5L0 923 aaKnown RBP16.53■□□□□ 0.24
ATG4B-221ENST00000483778 MED12LQ86YW9 2145 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 C2orf92A0A1B0GVN3 265 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 CCDC189A1A4V9 331 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 WDR1O75083 606 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 PIK3R1P27986 724 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 ARL1P40616 181 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-221ENST00000483778 XKP51811 444 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 CCNG1P51959 295 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 PHEXP78562 749 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 MGAT2Q10469 447 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 FUT7Q11130 342 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 DUSP8Q13202 625 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 FRG2Q64ET8 278 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 OR52E8Q6IFG1 317 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 C8orf74Q6P047 294 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 FAM180BQ6P0A1 224 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 FAM111BQ6SJ93 734 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 NUDT13Q86X67 352 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 ULK2Q8IYT8 1036 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 NOA1Q8NC60 698 aaKnown RBP16.52■□□□□ 0.24
ATG4B-221ENST00000483778 C7orf57Q8NEG2 295 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 OR4F6Q8NGB9 312 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 DIO2Q92813 273 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 NTNG2Q96CW9 530 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 GNRHR2Q96P88 292 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 FRG2BQ96QU4 278 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 ZNF559Q9BR84 538 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 PELOQ9BRX2 385 aaKnown RBP16.52■□□□□ 0.24
ATG4B-221ENST00000483778 DOHHQ9BU89 302 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 FUT8Q9BYC5 575 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 CDC42EP4Q9H3Q1 356 aaKnown RBP16.52■□□□□ 0.24
ATG4B-221ENST00000483778 WDR41Q9HAD4 459 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.52■□□□□ 0.241e-9■□□□□ 9.3
ATG4B-221ENST00000483778 ZNF225Q9UK10 706 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 CES1P1Q9UKY3 287 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms