RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 RSL24D1Q9UHA3 163 aaKnown RBP11.25□□□□□ -0.61
SND1-210ENST00000483503 NDRG4Q9ULP0 352 aaKnown RBP11.25□□□□□ -0.61
SND1-210ENST00000483503 TMCC3Q9ULS5 477 aa11.25□□□□□ -0.61
SND1-210ENST00000483503 SLC9A8Q9Y2E8 581 aa11.25□□□□□ -0.61
SND1-210ENST00000483503 SH3GLB1Q9Y371 365 aa11.25□□□□□ -0.61
SND1-210ENST00000483503 HCN4Q9Y3Q4 1203 aa11.25□□□□□ -0.61
SND1-210ENST00000483503 PCDHGA8Q9Y5G5 932 aa11.25□□□□□ -0.61
SND1-210ENST00000483503 SNX11Q9Y5W9 270 aa11.25□□□□□ -0.61
SND1-210ENST00000483503 GPC6Q9Y625 555 aaPredicted RBP11.25□□□□□ -0.61
SND1-210ENST00000483503 MDC1Q14676 2089 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 H0YGG7 62 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 AXIN1O15169 862 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 CASC3O15234 703 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 B4GALT2O60909 372 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 MITFO75030 526 aaPredicted RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 OR6B1O95007 311 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 OXSR1O95747 527 aaPredicted RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 NME1P15531 152 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 ELK4P28324 431 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 FEN1P39748 380 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 PXNP49023 591 aaPredicted RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 PRKAG1P54619 331 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 LIM2P55344 173 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 ARF3P61204 181 aaPredicted RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 RPS26P62854 115 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 MEP1AQ16819 746 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 EXOC3L2Q2M3D2 409 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 COLEC12Q5KU26 742 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 KCTD8Q6ZWB6 473 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 TSEN54Q7Z6J9 526 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 ZNF605Q86T29 641 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 SPEM1Q8N4L4 309 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 CAMKK1Q8N5S9 505 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 SMYD1Q8NB12 490 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 ZNF420Q8TAQ5 688 aaPredicted RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 ZCCHC10Q8TBK6 192 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 RAB8BQ92930 207 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 UCN3Q969E3 161 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 ELP4Q96EB1 424 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 SPACA7Q96KW9 195 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 COL21A1Q96P44 957 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 BARD1Q99728 777 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 LRRC61Q9BV99 259 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 ACTRT3Q9BYD9 372 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 TPSD1Q9BZJ3 242 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 CACYBPQ9HB71 228 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 CCNB1IP1Q9NPC3 277 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 KCMF1Q9P0J7 381 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 NTMQ9P121 344 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 PTGFRNQ9P2B2 879 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 KCND3Q9UK17 655 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 POMT2Q9UKY4 750 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 DAPP1Q9UN19 280 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 DOLKQ9UPQ8 538 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 SLC22A7Q9Y694 548 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 CEPT1Q9Y6K0 416 aa11.24□□□□□ -0.61
SND1-210ENST00000483503 SNRNP200O75643 2136 aaKnown RBP11.24□□□□□ -0.61
SND1-210ENST00000483503 A0A1W2PR77 199 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 LILRA5A6NI73 299 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 B4DGG1 531 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 TLR4O00206 839 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 SLC1A7O00341 560 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 P2RX6O15547 441 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 PRKRAO75569 313 aaKnown RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 SOX30O94993 753 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 CPNE6O95741 557 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 ANGPTL1O95841 491 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 HMGN2P05204 90 aaKnown RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 PORP16435 677 aaPredicted RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 OR1E2P47887 323 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 LIMS1P48059 325 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 XKP51811 444 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 TEKQ02763 1124 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 CDK5R2Q13319 367 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 RAPSNQ13702 412 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 LASP1Q14847 261 aaKnown RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 LAPTM4AQ15012 233 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 GPR19Q15760 415 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 DEFB134Q4QY38 66 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 ZNF542PQ5EBM4 170 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 RPS26P11Q5JNZ5 115 aaPredicted RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.23□□□□□ -0.61
SND1-210ENST00000483503 ANKRD34AQ69YU3 496 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 TMEM107Q6UX40 140 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 USP53Q70EK8 1073 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 GALNT15Q8N3T1 639 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 CSNK1A1LQ8N752 337 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 PATE1Q8WXA2 126 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 RLN3Q8WXF3 142 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 TANKQ92844 425 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 FKBP10Q96AY3 582 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 HRASLS5Q96KN8 279 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 C10orf90Q96M02 699 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 MS4A4EQ96PG1 132 aa11.23□□□□□ -0.61
SND1-210ENST00000483503 FCRL4Q96PJ5 515 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms